Dietzia sp. JS16-p6b: CT688_07110
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Entry
CT688_07110 CDS
T05397
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz03030
DNA replication
diz03410
Base excision repair
diz03420
Nucleotide excision repair
diz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CT688_07110
03410 Base excision repair
CT688_07110
03420 Nucleotide excision repair
CT688_07110
03440 Homologous recombination
CT688_07110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
diz03032
]
CT688_07110
03400 DNA repair and recombination proteins [BR:
diz03400
]
CT688_07110
Enzymes [BR:
diz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CT688_07110
DNA replication proteins [BR:
diz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CT688_07110
DNA repair and recombination proteins [BR:
diz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CT688_07110
NER (nucleotide excision repair)
GGR (global genome repair) factors
CT688_07110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AVZ39276
LinkDB
All DBs
Position
1574311..1577094
Genome browser
AA seq
927 aa
AA seq
DB search
MSTTSQTAEVSSAATTASSDASEAQGPTRLLLLDGHSLAFRAFYALPAENFSTASGQHTN
AVYGFLSMVANLVTTEEPTHLAVAFDVSRATLHRTAEYPEYKSTRSTAPEEFKGQVELIQ
EALVALGVRTLSLEGHEADDIIATLATQATGAETLICTGDRDALQLVSEEVTVLYPVKGV
SELARFTPDAVEAKYGVTPAQYPDVAALRGDTSDNLPGVPKVGDKTAAKWIVQYGSLSEL
IAHADEVKGKVGESFREHLPQVQLNRRITELTRDLDLGVQLDELTRRLPERADVNALFDR
LEFGPQARDRFLSAFLPEGAPEPVSEIELEQAAVLRAGEVSDWLAAHAPAGSRHGLVVVG
PSRPGAGDAQSVTVAAADGASGHIDLGRIDAGDEQALQAWLEDDAVFKAVHDAKAATHAL
MGRNLRLAGVTLDVALAAYLVRPGQRSYGLAELFQRHLQRELPEPEAAEKQLSLLDEVDE
SEAEQQAANSAATRARAVIDLAERLDVELEQVHGAQLLADMELPLVPVLARMEAKGIAVD
AAALDDLRDGFADRGRGAAEAAYAAIGGEQINLGSPKQLQVVLFDTLGMPKTKKTKTGYT
TDAKALEELLAKETGDTPGRAFLEALLLHREATKMRTTVEGLIKTIGDDGRIHTTFNQTV
AATGRLSSTDPNLQNIPVRTEDGRRIRKSFVVGEGYDCILTADYSQIEMRVMAHLSGDEG
LIEAFRTGEDLHSFVGSRAFGVPIDQVTPELRRRVKAMSYGLAYGLSAFGLAAQLGISQT
EAREQMDAYFSRFGGVRDYLHAVVDQARRDGYTETLFGRRRYLPELNSDNRLKRENAERA
ALNAPIQGTAADIIKAAMLKVDADLDERGLQSRLLLQVHDELVLEVAKGELDEVRGLVVD
RMYSAIELNVPLDVSTGTGPDWDSAAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccacgagccagaccgccgaagtcagttccgccgccaccaccgcgtccagcgac
gcctccgaggcgcagggccccacccgtctgttgctcctcgacgggcattcgctggcgttt
cgtgcgttctacgcccttcctgcagagaacttctccacggcctccgggcagcacaccaac
gcggtctacggcttcctgtcgatggtcgccaacctggtcaccacagaggaacccacccac
ctggcggtggcgttcgacgtctccagggcgaccctgcaccggacggccgagtacccggag
tacaagtccacgcgttcgacggctcccgaggagttcaagggacaggtcgagttgatccag
gaggcgctggtggcactcggggtccgcacgctgtccctggaagggcacgaggccgatgac
atcatcgcgaccctggccacccaggcgaccggtgccgagacgctcatctgcaccggggac
cgcgacgcgctgcagctggtctccgaggaggtgaccgtgctctacccggtcaagggggtc
tcggagctcgcccgattcaccccggacgcggtggaggccaagtacggggtgacccccgcg
cagtaccccgatgtcgccgcgctgcgcggcgacacctccgacaacctccccggcgtgccc
aaggtgggcgacaagacagcggcgaagtggatcgtccagtacggcagcctgtcggaactc
atcgcgcacgcagatgaggtcaagggcaaagtgggggagagcttccgcgaacacctcccg
caggtgcagctcaaccgtcgcatcaccgaactgacccgggacctcgacctcggcgttcag
ttggatgaactcacccggcgtctgcccgagcgggcggacgtcaacgccctgttcgaccgg
ctggagttcggcccccaggcccgagaccgcttcctctcggcgttcctcccggagggcgcg
cccgagccggtgtcggagatcgaactcgagcaggccgcggtcctccgcgcgggtgaggtc
tcggactggctcgccgcgcacgcgccggccggcagccggcacggcctcgtcgtcgtcggg
ccatcccgaccgggcgcgggggacgcgcagtcggtcaccgtggccgcggcggacggggca
tccggtcacatcgacctcggacgcatcgacgcgggtgacgagcaggctctacaggcgtgg
ctggaagacgacgcggtgttcaaggcggtccacgacgcgaaggccgccacccacgccctc
atgggccggaacctccgcttggccggtgtcacgctggatgtcgctctcgcggcctacctc
gtccgtcccggtcagcgtagttacgggctggcggagttgttccagcgccacctgcagcgc
gaattacccgagccggaggcggcggagaagcagctgtcgctcctggacgaggtcgacgag
tccgaggcagagcaacaggcggccaactcggccgccacccgggcccgcgccgtcatcgac
ctcgccgagcgcctggacgtggagctggagcaggtgcacggggcgcagctgctcgcggac
atggaactgccgctcgtccccgtcctggccaggatggaggcgaaaggcatcgccgtcgac
gcggcggccctcgacgacctacgtgacgggttcgccgaccgcgggcgtggcgcggcagaa
gcggcctacgccgcgatcggcggtgagcagatcaacctcgggtcgcccaaacaactccag
gtggtgctgttcgacaccctcggcatgcccaagaccaagaagaccaagacggggtacacc
accgacgccaaagcgctcgaggagctgctggccaaggagacgggggacactcccgggcgg
gccttcctggaggcgttgctcctgcaccgcgaggcgaccaagatgcgcaccacggtcgag
ggtctgatcaagaccatcggggacgacgggcgcatccacaccaccttcaaccagacggtc
gccgccaccggacgcctgtcgtccaccgacccgaacctgcagaacatccccgtccgcacc
gaggacggtcgacggatccggaagtcgttcgtcgtgggagaggggtacgactgcatcctc
accgccgactacagccagatcgagatgcgcgtgatggcccacctctcgggcgacgagggc
ctgatcgaggcgttccggaccggcgaggacctgcactccttcgttggttcccgggcgttc
ggggtgcccatcgaccaggtcacccccgagctccggcgccgggtcaaggcgatgagctac
gggctcgcctacgggctcagtgccttcgggctggccgcgcagctcggcatcagccagacc
gaggcccgcgagcagatggacgcctacttctcccgcttcggtggtgtccgcgactatctg
cacgcggtggtggaccaggcccgtcgtgacggctacaccgagaccctcttcggccgccgg
cgctacctgcccgagctcaactccgacaaccggctcaagcgcgagaacgccgagcgcgcc
gccctcaacgcccccatccagggcaccgccgccgacatcatcaaggccgcgatgctcaag
gtggacgccgacctcgacgagcggggtctgcagagccggctgttgctccaggtccacgac
gaactggtcctcgaggtggcgaaaggcgaactcgacgaggtccgaggcctcgtcgtcgac
cggatgtactccgccatcgaactcaacgtgccgctggacgtctccaccggcactgggccc
gactgggactccgccgctcactga
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