Dietzia sp. JS16-p6b: CT688_07590
Help
Entry
CT688_07590 CDS
T05397
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
diz
Dietzia sp. JS16-p6b
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CT688_07590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
diz03021
]
CT688_07590
Transcription machinery [BR:
diz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CT688_07590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Motif
Other DBs
NCBI-ProteinID:
AVZ39352
LinkDB
All DBs
Position
complement(1681212..1682597)
Genome browser
AA seq
461 aa
AA seq
DB search
MAATKTTSSDSAMSGDPSDTEVTGEAPAKKTSASRTPGKKTAAAKKTAAKKTAPAKKTAA
KKTAAKKTAAKKTAGAGEPADAAPIDDAPVEALEVEPDTAELEDVEVDVVDVEDAEADEE
TKDGPTAKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEV
ELAKRIEAGLYATWFMAQVAERGEKLTTAQRRDYKWIERDGVRAKNHLLEANLRLVVSLA
KRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIR
IPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTI
GDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLRSVLDTLSEREAGVVRLRFGLTDGLPR
TLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccacgaagaccaccagttcggattccgcgatgagcggcgatccgtcggacaca
gaggtcacgggcgaggcccccgccaagaagacctcggcgagcaggacacccgggaagaag
accgctgccgccaagaagaccgcggccaagaagaccgctcccgccaagaagacggcagcc
aagaagaccgccgcgaagaagaccgcggccaagaagacggcgggtgcgggcgagcccgcg
gacgccgcgccgatcgatgacgcacccgtcgaggccctcgaggtcgaaccggacaccgcc
gaactcgaggacgtcgaggtcgacgtcgtcgacgtcgaggacgcggaggccgacgaggag
accaaggacggccccaccgccaaggacaaggcgtcgggagacttcgtctgggacgaggac
gagtccgaggccctccgccaggcccgcaaggacgccgagctcaccgcgtccgccgactcc
gtccgcgcctacctcaagcagatcggcaaggtcgccctgctcaacgccgaggaggaggtc
gagctggccaagcggatcgaggccggcctctacgccacctggttcatggcgcaggtcgcg
gagcgcggtgagaagctcaccaccgcccagcgacgggactacaagtggatcgagcgggac
ggggtccgcgccaagaaccatctgctcgaggccaacctccgcctcgtcgtgtcccttgcc
aagcggtacaccggtcgcggaatggcgttcctggacctcatccaggagggcaacctcggc
ctgatccgcgctgtggagaagttcgactacaccaaggggtacaagttctcgacctacgcg
acgtggtggatccgccaggccatcacacgcgccatggccgaccaggcccgcaccatccgg
atcccggtccacatggtggaggtcatcaacaaactcggccgcatccagcgggagctcctc
caggacctgggccgcgagcccaccccggaggagctcgccaaggagatggacatcaccccc
gagaaggtgctggagatccagcagtacgcgcgagagcccatctcgctcgaccagaccatc
ggtgacgagggcgactcgcagctcggcgacttcatcgaggactccgaggccgtggtggcc
gtggacgccgtgagcttcaccctcctgcaggaccagctccgctccgttctcgacaccctc
tccgagcgcgaggcgggcgttgtgcgcttgcgcttcggcctcaccgacgggctgccccgc
acgctcgacgagatcgggcaggtctacggcgtcacgcgcgagcggatccgccagatcgag
tccaagaccatgtcgaaactgcgtcacccctcgcgatcccaggtcctgcgcgactacctg
gactga
DBGET
integrated database retrieval system
