Dietzia sp. JS16-p6b: CT688_08090
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Entry
CT688_08090 CDS
T05397
Name
(GenBank) hypothetical protein
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
diz
Dietzia sp. JS16-p6b
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
diz01002
]
CT688_08090
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
diz01011
]
CT688_08090
Peptidases and inhibitors [BR:
diz01002
]
Cysteine peptidases
Family C40
CT688_08090
Peptidoglycan biosynthesis and degradation proteins [BR:
diz01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
CT688_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
DUF4200
Tropomyosin
Motif
Other DBs
NCBI-ProteinID:
AVZ39438
LinkDB
All DBs
Position
complement(1780456..1781889)
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AA seq
477 aa
AA seq
DB search
MIQAPVVAAQVEPAASPEDISGLIRAVADASARLDATRQDISVKREGVNKTLVDLQMARL
DLDRSIAEADRTIAEREQAESGVESARSTLDEYSRLLHRQGTAPGAASAILDPGGPADAG
RRQEFLRRAAADQQHVVGDMVAAVDAAARRESDAALARTEAEQRYADASSRRDAAESEVA
AVYAEVTDLEAEVADLTRALEQNQIALEESGATPAGPQTADPYTVDQDALRDEAVRALAA
DPRAGRQAADIASALPGHLDLGAVRQFAAGSSDGAARAIGGTIDAGSVGAAIDAGVNGNT
EAIIQQVADAIGRADFGSIQQGPAAPAPAPGQGGGNTGTPSSSARVETVVNRALSQLGVP
YAWGGGDANGPTRGIRDGGVADSHGDYNKIGFDCSGLMIYAFAGIGKALPHFTGYQYTAG
PQYPVATRQRGDMLFWPGHVALYLGDGRMVEAPQSGDVVKISPVRMAGISPMVVRLT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgatccaggcgcccgtcgtggcggcacaggtggaacccgcggcctcgcccgaggacatc
agcggcctgatccgcgcggtcgcggatgcgtccgctcgactcgacgccacccgccaggac
atctcggtcaagcgcgagggggtcaacaagaccctcgtcgacctgcagatggcccgactc
gacctcgaccggtcaatagcggaggccgaccgcacgatcgccgagcgcgagcaggcggaa
tccggcgtggagtccgccaggagcaccctcgacgagtactcccggttgttacatcgccag
gggacggctccgggagcggcctccgcgatcctggacccgggcggccccgccgatgccggg
cgacgacaggagttcctcaggcgtgcggccgcggaccagcagcacgtcgtgggggacatg
gtcgccgcggtggacgccgcggcccgcagggagtccgacgccgcactcgcgaggacggaa
gccgaacagcgctacgccgacgcctcctcacgacgtgacgccgcggagtccgaggtggcg
gccgtctacgccgaggtcacagatctggaggcggaggtcgccgacctgacccgtgccctg
gagcagaaccagatcgcgctcgaggagtccggggccactcccgcaggaccccagaccgcc
gacccgtacacggtcgaccaggacgcgttgcgcgacgaggcggtccgcgccctcgccgcg
gacccccgggcggggcgccaggcggcggacatcgcctctgcgctccccggccatctcgac
ctcggcgcggtgcgccagttcgccgcgggatcctccgacggggcggcgagggcgatcggc
gggacgatcgacgccggcagcgtcggagccgcgatcgacgcgggtgtcaacgggaacacc
gaggcgatcatccaacaggtggccgacgcgatcggacgggccgacttcgggtccatccaa
cagggcccggcggcacctgctcccgcacccggccaggggggcggcaacacgggcaccccg
tcgagttcggccagggtggagacggtcgtcaaccgggcactgtcccaactcggcgtcccc
tacgcctggggaggcggagacgccaacgggcccacgcgcggcatccgggacggtggcgtc
gcggacagtcacggtgactacaacaagatcggcttcgactgctcaggcctgatgatctac
gcgttcgccgggatcggcaaagccctcccacacttcaccggctaccagtacacggcgggc
ccccagtacccggtggccacccgccagcgcggcgacatgctcttctggcccggtcacgtg
gcgctgtacctgggtgacggccggatggtcgaggccccgcagtccggcgacgtcgtcaag
atctcaccggtgcggatggcggggatctcacccatggtcgtccggctgacctga
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