Dietzia sp. JS16-p6b: CT688_10115
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Entry
CT688_10115 CDS
T05397
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CT688_10115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
diz03400
]
CT688_10115
Enzymes [BR:
diz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CT688_10115
DNA repair and recombination proteins [BR:
diz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CT688_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AVZ39766
LinkDB
All DBs
Position
complement(2212385..2213053)
Genome browser
AA seq
222 aa
AA seq
DB search
MAQLVVTGIPRRPSPMGGRRPKRDELARFATADPHAVDDVLPADAEQLRLLIVGVNPGLW
TAAVNAPFARPGNRFWPSLHRAGLTDHVVDAAEGLSAPDEQQLLSRGLGMTNLVGRATAR
ADELTREELRAGAERVTTLAGELKPRVVAVAGITAFRTAFALPKAGYGKQNTSEVAGWPG
EVTLWVLPQPSGLNAHETLDSLAEHWREVWNAVEESRHSAAG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttggtcgtgaccggcattccacggcgcccctcaccgatgggcgggcgccgc
ccgaagcgcgacgagctggcccggttcgccaccgcggacccacacgcggtcgacgacgtc
ctgcccgccgacgccgagcagctgcgacttctcatcgtcggggtcaatccgggcttgtgg
accgcggccgtcaacgcgcccttcgcgaggccgggaaaccggttctggccgtcactgcac
cgggcggggctgaccgatcacgtcgtggatgccgcggagggactgtcggccccggacgag
caacagctcctctcgcgggggctcgggatgacgaatctcgtgggccgggcgaccgcgagg
gcggacgaactcacccgggaggaactgcgcgcgggcgcggagcgcgtgacgacgctggcc
ggggaactgaagccccgagtcgtggccgtcgcggggatcacggccttccggaccgcgttc
gcactgccgaaggctggttacgggaagcagaacacctcggaggtcgctgggtggcccggc
gaggtcacgctgtgggtgctcccgcagcccagcgggttgaacgcgcacgagactctcgac
tccctggccgaacactggcgggaggtctggaacgcggtcgaggagagtcggcactccgcc
gcgggctga
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