KEGG   Dyella japonica: HY57_02120
Entry
HY57_02120        CDS       T03215                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dja  Dyella japonica
Brite
KEGG Orthology (KO) [BR:dja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dja03400]
    HY57_02120
Enzymes [BR:dja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HY57_02120
    5.6.2.6  RNA 3'-5' helicase
     HY57_02120
DNA repair and recombination proteins [BR:dja03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HY57_02120
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HAD DUF5805 DUF7346
Other DBs
NCBI-ProteinID: AIF46131
UniProt: A0A075JVL2
LinkDB
Position
complement(497038..501537)
AA seq 1499 aa
MPLQDFHPAVAAWFQASFPEPTAPQTAAWPSIRSGRHTLVAAPTGSGKTLTAFLSVIDAL
VREGVAQDGALPDATTVVYVSPLKALSNDIRINLEAPLEGIRAELKKMGLPDVAIRTAVR
TGDTPQAERTWMRKQPPHILVTTPESLYILLGSESGRAMLKSTREVIVDEIHALASSKRG
AHLALSLERLESLCQRRLLRIGLSATQKPIEDVAKFLVGAHAQLSGPSCASEKGEDCVNI
INVGHTRHRDLAIEVPPVPLEAVMSNDCWELVYNRLAQLVESHRTTLVFVNTRRMAERVA
RHLSERMGTEAVAAHHGSLAKEQRLDAEQRLKRGDLRVLVATASLELGIDIGDVDLVCQL
SSPRSIAAFLQRAGRSGHAVNGTPKARLFPTSRDDLVECAALLDCVRRGELDTLIQPPQP
LDVLAQQIVAEVACQEWNEDALYDTLRRAYPYRDLTREQFDATVRMLADGFTTRNGPRAA
YIHRDAVHKQLRARRNARLTAVTSGGAIPDTADYLVVLEPQATIVGSVNEDFAVESLAGD
IFQLGNTSYRILRVERDRLRVEDAQGVPPNIPFWLGEAPGRTAELSHGVSRLREDIAAQL
DQGGLAAVMHELMHTLGMSESAAQQLADYMAAARAALGVLPTQDTLVFERFFDESGGTQL
IIHTPWGSRINRAWGLALRKRFCRQFNFELQAAATEDAIVLSLSTSHSFPLEEVARYLHS
STAEHVLVQALLDAPLFPVRWRWNATTSLALPRFQGGKKVPPQLQRMKSEDLLATVFPDQ
VACLENIVGEREVPDHPLVNQTMHDCLREAMDVDGLLHILRGLEEGGITVVARDLAAPSP
LAGEVLSAAPYAYLDDAPLEERRTQAVQSRRWSDPESADDLGRLDPDAIASVRDEAWPQV
RSADEMHEALGILGGITQAEADANEGWNAWLNSLAKNHRAARLSPSPLVGKGWGEGANRP
PSNTEAGGIWTTAEHLPKWQAVQPGAARHPPIDAPAEYAAQSWTREDALLELVRGRLTGS
GPTTAAQLSTTLHVEPGDIDLTLLRLQSEGYVMQGHFTPGTHEVEWCERHLLARIHRYTI
GRLRREIEPVSRRDLMRFLFDWQHVAPGARLTGPDALPAVLTQLEGFEAAASAWESELLP
ARIDDYAITWLDEQCRAGRVSWSRLRSGSGGGGGPVRATPIVLLPRRSLALWSCAAAVDA
NAQDAVVSSRAQAVLDALRDHGALFFDELMSDTRLLRTELEDALGELVAAGRVTADSFAG
LRALLVPAAKRDNHRHRRLRRHMLTGIEDAGRWSLVRSDRAVLLPSGEKMPGRADEGRVL
AKTPATSNKKLDQEQLEHIARSLLRRYGVVFWKLLEREAPWLPSWRELLRVYHRLEARGE
IRGGRFVEGLVGEQFALPEAIARLRAVRQQEPHGELVLVSGSDPLNLVGTVLAGNKLPAV
TGTRVLYEDGVPVAAWVANKPQWLTESTPAQQQHWRNALLRRSDASSLKANARAVGFND
NT seq 4500 nt   +upstreamnt  +downstreamnt
atgcccctgcaagactttcatccggcggtcgccgcctggttccaggccagctttcctgaa
ccaacggcaccacaaacagccgcatggccgtccatacggtcaggccggcacacgctggtc
gccgcgccgacaggttcaggcaagacactcaccgccttcctctccgtcatcgacgcgctg
gtacgcgaaggcgtggcccaggacggcgcgctgcccgacgccaccaccgtggtctacgtc
tcgccgctgaaggcgctgtccaacgatatccgcatcaacctcgaggcgccgctggaaggc
attcgcgccgagttgaagaagatgggcctgccggacgtggccatccgcaccgccgtgcgc
acgggcgacacgccgcaggccgagcgcacctggatgcgcaagcaaccgccgcacattctg
gtcaccacgccggagtcgctctacatcctgctgggctcggagtcgggccgcgccatgctg
aagagcacgcgcgaagtgatcgtggatgaaatccacgcactggcctccagcaagcgcggt
gcgcatctggcgctgtcgctggagcggttggagtcgttgtgccagcggcgcttgttgcgc
atcggtttgtcggcgacgcagaagccgatcgaggatgtcgcgaagttcctggttggcgcg
catgcccaactttctggcccctcatgcgccagcgagaagggagaggactgcgtcaacatc
atcaacgtcggccacacccgccaccgcgacctcgccatcgaagttccgccggttcccctt
gaagcggtcatgtccaacgactgctgggaactggtctacaaccgcctcgcgcaactggtg
gagtcgcaccgcaccacgctggtcttcgtcaacacgcgccgcatggccgagcgcgtggcg
cgccacctgtccgagcgcatgggcacggaagccgtcgccgcccaccacggcagcctggcc
aaggagcagcgcctcgacgccgagcagcgcctcaagcgtggcgacctgcgcgtgctggtg
gccaccgcctcgctggaactgggcatcgacatcggcgacgtggacctggtctgccagctc
tcctcgccgcgctccatcgccgccttcctgcagcgcgccggccggtccggccatgcggtg
aatggcacgcccaaggcgcgcctgttccccacctcgcgcgatgaccttgtcgaatgcgcc
gccttgctcgactgcgtgcgccgcggcgaactcgacacgctgatccagcccccgcaaccg
ctggacgtgctggcgcagcagatcgttgccgaagtggcttgccaggaatggaacgaggac
gcgctctacgacacgctgcgccgcgcgtatccctaccgcgacctcacgcgcgaacagttc
gacgccaccgtgcgcatgcttgccgatggcttcaccacccgtaacggcccacgcgccgcg
tacatccaccgcgatgccgtgcacaagcagctgcgcgcacgccgcaacgcacgcctcact
gctgtcacctccggcggcgccatccccgacaccgccgattacctggtggtgctggaaccg
caggccaccatcgtcggttcggtcaacgaagacttcgccgtggaaagcctggccggcgac
atcttccagctgggcaacaccagctaccgcatcctgcgcgtggagcgcgaccgcctgcgc
gtggaagacgcgcaaggcgtgccgcccaatatcccgttctggctgggcgaggcaccgggc
cgtaccgccgagctgtcgcatggcgtgtcgcgtttgcgcgaggacatcgccgcccagctc
gatcagggtggcttggccgccgtgatgcatgagctgatgcacacgctgggcatgagcgaa
tccgccgcgcagcagctggccgactacatggccgccgcccgcgccgcgcttggcgtgctg
cccacgcaggacacgctggtgttcgaacgcttcttcgatgaatccggcggcacccagctc
atcatccacaccccgtggggcagccgtatcaatcgtgcgtggggcctggcgctgcgcaag
cgcttctgccggcagttcaacttcgaactacaggcggccgcgacggaagatgccatcgtg
ctgtcgctttccaccagccacagcttcccgctggaggaggtggcgcgctacctgcactcc
agcaccgccgaacacgtgctggtgcaggccctgctcgacgcgccgctgttcccggtgcgc
tggcgctggaacgccaccacctcgctcgcgctgccacgcttccaaggcggcaagaaagtg
ccgccgcaactgcagcgcatgaagagcgaagacctgctcgccaccgtattccccgaccag
gtcgcctgcctggagaacatcgtcggcgagcgcgaggttcccgaccatccgctggtcaac
cagaccatgcacgattgcctgcgcgaagcgatggacgtcgacggcctgctgcatatcctg
cgtgggctggaagagggcggcattaccgtggtcgcacgcgaccttgccgcccccagtccg
cttgccggcgaagtgctcagcgccgccccctacgcctacctcgacgacgcaccgctggag
gagcgtcgcacccaagccgtgcaatcccgtcgctggagcgacccggaaagcgccgacgac
ctcggacgcctcgacccggatgccatcgcttccgtgcgcgacgaagcgtggccacaggtg
cgcagtgccgacgagatgcacgaagccctgggcatccttggtggcatcacgcaggccgaa
gcggatgcgaacgagggttggaacgcgtggctgaacagcctcgcgaaaaatcaccgggcc
gcgcgcctgtctccctctccccttgtggggaagggctggggagagggggccaaccggccg
ccgtccaacaccgaagcaggcggcatctggaccaccgccgaacacctccccaagtggcag
gccgttcaacccggcgcggcacgccatccacccatcgacgcccccgccgagtacgccgcc
caaagctggacccgtgaagacgccctgctggaactcgtgcgcggccgccttaccggctcc
ggcccgacgacggctgcgcaactctcgacgacactccacgtcgagcccggcgacatcgat
ctgaccctgctgcgcctgcaatccgaaggctacgtgatgcagggccacttcacgcccggc
acgcacgaggtggagtggtgcgaacgccacctgctggcgcgcatccaccgctacaccatc
ggccgcctgcgccgcgaaatcgaacccgtcagccgccgcgacctgatgcgtttcctgttc
gactggcaacacgttgcccccggtgcgcgcctcaccggccccgacgcgctgcccgccgtg
ctgacccagctcgaaggcttcgaggccgccgccagtgcctgggaaagcgaactgctgccc
gcgcgcatcgacgactacgccatcacctggctggacgaacagtgccgcgccggccgcgtc
agctggagccgcctgcgcagcggttccggcggtggcggtggccccgtgcgcgccacaccc
atcgtgctgctgccgcgccgcagcctggccctgtggagctgcgctgccgcggtcgacgcc
aacgcgcaggacgccgttgtctcttcgcgcgcgcaggccgtgctcgacgccctgcgcgac
cacggcgccctgtttttcgacgaactgatgagcgatacccgcctgctgcgcaccgaactg
gaagacgccctgggcgaactcgttgccgccggccgcgtcaccgccgacagcttcgccggc
ctgcgcgcactgctcgttcccgcggccaaacgcgacaaccatcgtcaccgccgcctgcgc
cgccacatgctcaccggcatcgaggatgccggccgctggtccctggtgaggtcagaccgg
gcagttcttctcccctccggagagaagatgcccggcagggcagatgaggggcgagtgctc
gccaaaaccccagctacctcaaacaagaagctcgaccaggaacaactggaacacatcgcc
cgcagccttctccggcgctacggcgtcgtcttctggaagctcctcgagcgcgaggccccg
tggcttcccagctggcgcgaactgctacgcgtctaccatcgcctggaagcccgcggcgaa
atccgcggcggccgcttcgtcgaaggcctggtcggcgaacagttcgccctgcccgaagcc
atcgcccgactgcgcgccgtgcgccagcaggagccccatggcgagctcgtcctcgtcagc
ggctccgaccccctcaacctcgtcggcaccgtgctggccggcaacaagcttcccgccgtc
accggcacccgcgtgctctacgaagacggcgtaccggttgccgcatgggtcgccaacaaa
ccccagtggctgaccgagtccaccccggcccagcaacaacactggcgcaacgccctgttg
cgccgcagcgacgcaagcagcctgaaggccaacgcgcgagcggtcggcttcaacgactag

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