KEGG   Dyella japonica: HY57_03850
Entry
HY57_03850        CDS       T03215                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03086  RNA polymerase primary sigma factor
Organism
dja  Dyella japonica
Pathway
dja02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dja00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HY57_03850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dja03021]
    HY57_03850
Transcription machinery [BR:dja03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HY57_03850
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DUF2764 SelB_WH_2nd_bact
Other DBs
NCBI-ProteinID: AIF46453
UniProt: A0A075K2L4
LinkDB
Position
complement(914363..916225)
AA seq 620 aa
MNSKAPEQQSEIKALISKGLEQGYLTYAEINDHLPDDIVDPEQIEDIMAVLKGVGIEVHD
AAPDSDPLSDNAPGASTDDEAAAEEAVALLSAVDSEVGRTTDPVRMYMREMGTVELLTRE
GEIAIAKRIEEGLGQVQTALASFPLTIELLLEEYDQHLDGKRRLSEILAGFADLEEAADA
AQAAAADAEVEDSDAESDEDEGEEGSGEEEETGPTGPDPEEVKRRMELLRDYYGKFQKAA
PKATDINDKKVTKLRDQMAEEFLKLKLPSALIDSFVRKLREVVNDIRHHERVLMDIFVKH
VKMPKAEFLKTFPSNEGNLEWANELGRKRQKWSPNIKPHKEAIDAEQEKLASIERKLFLP
LTDIKEINRTMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQF
GREPTPEELAKEMDMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSNAASPIES
ATETGLMETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKA
LRKLRHPSRSEQLRSFLDID
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgaatagcaaagctcctgagcaacagtctgaaatcaaggcgctcatctccaagggtctg
gagcagggctacctgacttacgccgagatcaacgaccacctgcccgacgacatcgtcgat
ccggagcagatcgaagacatcatggcggtgctcaagggcgtcggcatcgaggtgcatgac
gccgcgccggactccgaccccctgtcggacaacgctccgggcgcctccaccgacgatgag
gccgccgccgaagaggccgtggcgctgctgtcggccgtcgactccgaagtgggccgcacc
accgaccccgtccgcatgtacatgcgtgagatgggtacggtcgagctgctgacccgcgag
ggcgaaatcgccatcgccaagcgcatcgaggaaggcctgggccaggtgcagaccgcgctc
gcctccttcccgctgaccatcgagctgctgctcgaggaatacgaccagcacctggacggc
aagcgccgcctgagcgaaatcctggccggcttcgccgatctggaagaagccgccgacgcc
gcccaggctgccgcggccgacgccgaggtcgaagactccgacgccgaatccgacgaggac
gaaggcgaagaaggctcgggcgaagaggaagaaaccggcccgaccggtccggatccggaa
gaggtcaagcgccgcatggaactgctgcgcgactactacggcaagttccagaaggcggcc
cccaaggccaccgacatcaacgacaagaaggtcaccaagctgcgcgaccagatggctgag
gagttcctcaagctcaagctgccgtccgcgctgatcgacagcttcgtgcgcaagctgcgc
gaagtggtgaacgacatccgtcaccacgagcgcgtgctgatggacatcttcgtcaagcac
gtgaagatgcccaaggccgagttcctcaaaacgttcccgagcaacgagggcaacctcgag
tgggcgaacgagctgggccgcaagcgccagaagtggtcgccgaacatcaagccgcacaag
gaagcgatcgacgccgagcaggaaaagctcgcctccatcgagcgcaagctgttcctgccg
ctgaccgacatcaaggaaatcaaccgcaccatgtcgatcggcgaggccaaggcccgccgc
gcgaagaaggaaatggtcgaggccaacctgcgcctggtcatctccatcgccaagaagtac
accaaccgcggcctgcagttcctcgacctcatccaggaaggcaacatcggcctgatgaag
gccgtggacaagttcgaataccgccgcggctacaagttctccacgtacgccacgtggtgg
atccgccaggccatcacccgctcgatcgccgaccaggcacgcaccattcgtatcccggtg
cacatgatcgaaacgatcaacaagttgaaccgcatttcccgccagatgctgcagcagttc
ggccgcgagccgacgccggaggagctggccaaggaaatggacatgcccgaggacaagatc
cgcaaggtgctgaagatcgcgaaggaaccgatctcgatggaaacccccatcggcgacgac
gaagattcgcatctgggcgacttcatcgaggattccaacgcggcttcgccgatcgagtcc
gccacggaaacgggcctgatggaaaccgtgcgtgacgtgctcgccggcctcaccccgcgt
gaagcgaaggtgctgcgcatgcgcttcggcatcgacatgaacaccgaccacacgctggaa
gaagtcggcaagcagttcgacgtgacgcgcgagcgcatccgtcagatcgaggccaaggcg
ttgcgtaagctgcgtcacccgagccgctcggagcagctgcgctcgttcctcgatatcgac
taa

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