Dyella japonica: HY57_03850
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Entry
HY57_03850 CDS
T03215
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
dja
Dyella japonica
Pathway
dja02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HY57_03850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dja03021
]
HY57_03850
Transcription machinery [BR:
dja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HY57_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2764
SelB_WH_2nd_bact
Motif
Other DBs
NCBI-ProteinID:
AIF46453
UniProt:
A0A075K2L4
LinkDB
All DBs
Position
complement(914363..916225)
Genome browser
AA seq
620 aa
AA seq
DB search
MNSKAPEQQSEIKALISKGLEQGYLTYAEINDHLPDDIVDPEQIEDIMAVLKGVGIEVHD
AAPDSDPLSDNAPGASTDDEAAAEEAVALLSAVDSEVGRTTDPVRMYMREMGTVELLTRE
GEIAIAKRIEEGLGQVQTALASFPLTIELLLEEYDQHLDGKRRLSEILAGFADLEEAADA
AQAAAADAEVEDSDAESDEDEGEEGSGEEEETGPTGPDPEEVKRRMELLRDYYGKFQKAA
PKATDINDKKVTKLRDQMAEEFLKLKLPSALIDSFVRKLREVVNDIRHHERVLMDIFVKH
VKMPKAEFLKTFPSNEGNLEWANELGRKRQKWSPNIKPHKEAIDAEQEKLASIERKLFLP
LTDIKEINRTMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQF
GREPTPEELAKEMDMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSNAASPIES
ATETGLMETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKA
LRKLRHPSRSEQLRSFLDID
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaaagctcctgagcaacagtctgaaatcaaggcgctcatctccaagggtctg
gagcagggctacctgacttacgccgagatcaacgaccacctgcccgacgacatcgtcgat
ccggagcagatcgaagacatcatggcggtgctcaagggcgtcggcatcgaggtgcatgac
gccgcgccggactccgaccccctgtcggacaacgctccgggcgcctccaccgacgatgag
gccgccgccgaagaggccgtggcgctgctgtcggccgtcgactccgaagtgggccgcacc
accgaccccgtccgcatgtacatgcgtgagatgggtacggtcgagctgctgacccgcgag
ggcgaaatcgccatcgccaagcgcatcgaggaaggcctgggccaggtgcagaccgcgctc
gcctccttcccgctgaccatcgagctgctgctcgaggaatacgaccagcacctggacggc
aagcgccgcctgagcgaaatcctggccggcttcgccgatctggaagaagccgccgacgcc
gcccaggctgccgcggccgacgccgaggtcgaagactccgacgccgaatccgacgaggac
gaaggcgaagaaggctcgggcgaagaggaagaaaccggcccgaccggtccggatccggaa
gaggtcaagcgccgcatggaactgctgcgcgactactacggcaagttccagaaggcggcc
cccaaggccaccgacatcaacgacaagaaggtcaccaagctgcgcgaccagatggctgag
gagttcctcaagctcaagctgccgtccgcgctgatcgacagcttcgtgcgcaagctgcgc
gaagtggtgaacgacatccgtcaccacgagcgcgtgctgatggacatcttcgtcaagcac
gtgaagatgcccaaggccgagttcctcaaaacgttcccgagcaacgagggcaacctcgag
tgggcgaacgagctgggccgcaagcgccagaagtggtcgccgaacatcaagccgcacaag
gaagcgatcgacgccgagcaggaaaagctcgcctccatcgagcgcaagctgttcctgccg
ctgaccgacatcaaggaaatcaaccgcaccatgtcgatcggcgaggccaaggcccgccgc
gcgaagaaggaaatggtcgaggccaacctgcgcctggtcatctccatcgccaagaagtac
accaaccgcggcctgcagttcctcgacctcatccaggaaggcaacatcggcctgatgaag
gccgtggacaagttcgaataccgccgcggctacaagttctccacgtacgccacgtggtgg
atccgccaggccatcacccgctcgatcgccgaccaggcacgcaccattcgtatcccggtg
cacatgatcgaaacgatcaacaagttgaaccgcatttcccgccagatgctgcagcagttc
ggccgcgagccgacgccggaggagctggccaaggaaatggacatgcccgaggacaagatc
cgcaaggtgctgaagatcgcgaaggaaccgatctcgatggaaacccccatcggcgacgac
gaagattcgcatctgggcgacttcatcgaggattccaacgcggcttcgccgatcgagtcc
gccacggaaacgggcctgatggaaaccgtgcgtgacgtgctcgccggcctcaccccgcgt
gaagcgaaggtgctgcgcatgcgcttcggcatcgacatgaacaccgaccacacgctggaa
gaagtcggcaagcagttcgacgtgacgcgcgagcgcatccgtcagatcgaggccaaggcg
ttgcgtaagctgcgtcacccgagccgctcggagcagctgcgctcgttcctcgatatcgac
taa
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