Dyella japonica: HY57_03940
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Entry
HY57_03940 CDS
T03215
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dja
Dyella japonica
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dja03032
]
HY57_03940
03400 DNA repair and recombination proteins [BR:
dja03400
]
HY57_03940
Enzymes [BR:
dja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HY57_03940
DNA replication proteins [BR:
dja03032
]
Prokaryotic type
DNA Topoisomerases
HY57_03940
DNA repair and recombination proteins [BR:
dja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HY57_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
RNA_pol_Rpc4
Motif
Other DBs
NCBI-ProteinID:
AIF46471
UniProt:
A0A075JWG9
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All DBs
Position
935549..938074
Genome browser
AA seq
841 aa
AA seq
DB search
MAKNLLIVESPAKAKTINKYLGKDFQVLASYGHVRDLKPKEGAVDPDNGFAMAYEVIDRN
EKHVDAIAKAAKVADDIYLATDLDREGEAISWHISEILKERGLTKGKQLHRVVFSEITPK
AIKAAVAAPRQLSHDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWTIEASLHHPEGDFSARLTKLHGKKFEQFDLTNEHDALAARHALKE
AARGHLTVSDVSSKERKRRPAPPFTTSTLQQEAARKLGFSTSRTMKVAQGLYEGVSIGTE
GNVGLITYMRTDSVALSEDAVGELRQLIARDYGNKALPDHAQTYKSKAKNAQEAHEAIRP
TSAMRTPREVAAFLNDEQRKLYELIWKRTVACQMIHATMNTVSVDFNVPHVKGGDAAFRS
TGTTVVDPGFLAVYEEGRDQKTAEDEDEGRRLPKLDVGERVALQDVLADQHFTEPPPRYS
EASLVKALEEHGIGRPSTYASIIQVLLNREYVFLDSRRFKPTDVGRAVSKFLTAHFTRYV
DYDFTAKLEDELDAVSRGEEQWVPLMERFWQPFKQQVDEKTETVDRSEATGARELGTDPK
SGKPVSVRLGRYGPYAQIGDKDTDEKLQFASLRPGTSMHTITLEDALELFKLPRKLGQAE
NGDEVSVGVGRFGPFVKQGSTYASLKAEDDPYTIELPRALQIVQEKLEMLANRIIKDFGN
GIQVLNGRFGPYITDGEKNARIPKDQEPKDLTEAQCVELLAAAPAKKGRGAFKKAAAKKA
AAEKKPAAKKAAAKSATKTAAKKTTAKKAATKKTAAKKTAAKKATTKTATKKPAAKKKAD
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaacctgctcatcgtcgagtcgccggccaaggcgaagacgatcaacaaatac
ctcggcaaggacttccaggtcctggcctcctatgggcacgtgcgtgacctgaagccgaag
gaaggggccgtggaccccgacaacggcttcgccatggcctacgaggtgatcgaccgcaac
gaaaagcacgtcgacgccatcgccaaggcggccaaggtggccgacgacatctatctcgcg
accgacttggatcgcgagggtgaggcgatctcctggcacatcagcgagattctcaaggag
cgcggcctgaccaagggcaagcagctccatcgcgtggtgttctccgagatcacgcccaag
gcgatcaaggccgccgtggcggcgccgcgccagctttcgcacgacctggtggacgcccag
caggcgcgccgcgcgctggattacctggtgggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgtggcctgtccgccggccgcgtgcagtcgcccgcgctgcgcatgatcgtg
gagcgcgaggaagagatcgaagccttcgttgcccgcgagtactggactatcgaggcctcg
ctgcaccatccggaaggcgacttctcggcgcgcctcaccaagctccacggcaagaagttc
gagcagttcgacctcaccaacgaacacgatgccctggccgcacgccacgcgctgaaggag
gccgcccgcggccacctgaccgtcagcgacgtcagcagcaaggagcgcaagcgccgtccg
gcaccgccgttcaccacctccacgctgcagcaggaggccgcgcgcaagctcggtttctcc
accagccgcaccatgaaggtcgcgcagggcctgtacgagggcgtgtcgatcggcaccgaa
ggcaacgtcggcctgatcacctacatgcgtaccgactcggtggccttgtccgaggacgcc
gtgggcgagctgcgccagctgatcgcgcgcgactacggcaacaaggcgctgccggatcac
gcgcagacctacaagtccaaggccaagaatgcgcaggaagcgcatgaagccattcgcccg
acctcggccatgcgcacgccgcgcgaggtcgctgcgttcctcaacgatgagcagcgcaag
ctttacgagctgatctggaagcgcaccgtcgcctgccagatgatccacgcgaccatgaac
accgtgtcggtggatttcaatgtgccgcacgtgaagggtggcgacgccgcgttccgctcc
accggcaccaccgtggtcgacccgggcttccttgccgtgtacgaggaaggccgcgaccag
aagaccgccgaggacgaggacgaaggccgtcgcctgcccaagctcgacgtgggcgagcgc
gtggcgctgcaggacgtcctggccgaccagcacttcaccgagccgccgccgcgctattcc
gaagcgagcctggtgaaggcgctggaagagcacggcatcggccgtccgtcgacctacgcc
agcatcatccaggtgctgctcaaccgcgaatacgtgttcctcgacagccgtcgcttcaag
ccgacggacgtgggtcgcgccgtcagcaagttcctcaccgcgcatttcacccgctacgtc
gactacgacttcaccgccaagctcgaggacgagctggatgccgtgagccgtggcgaagaa
cagtgggtgccgctgatggagcgcttctggcagccgttcaagcagcaggtggacgagaag
accgaaacggtcgaccgcagcgaagccaccggcgcgcgcgagctgggcaccgatccgaaa
tccggcaagccggtgtcggtgcgcctgggccgctacgggccgtacgcgcaaatcggcgac
aaggacacggacgagaagctgcagttcgcctcactgcgtcccggcacgagcatgcacacc
atcacactggaagacgcgctggagctgttcaagctgccgcgcaagctcggccaggcggag
aacggtgacgaggtgtcggtgggcgtgggccgcttcggtccgttcgtgaagcagggcagc
acctatgcctcgctcaaggccgaggacgacccgtacaccatcgagctgccgcgcgccctg
cagatcgtgcaggaaaagctggagatgctcgccaaccgcatcatcaaggatttcggcaac
ggcattcaggtgctcaacggccgcttcggcccgtacatcaccgacggcgagaagaacgcg
cgcatcccgaaggatcaggaacccaaggacctgaccgaagcgcagtgcgtggaactactc
gccgctgctccggcaaagaagggccgcggcgcgttcaagaaggcggcggcgaagaaggcc
gccgccgagaagaagccggcggccaagaaggcggctgccaagtccgccaccaagacagcc
gccaagaagaccaccgccaagaaggcagcgaccaagaagaccgctgcgaaaaagacggcc
gcgaaaaaggcgaccaccaagaccgcgaccaagaagcctgccgccaagaaaaaggcggac
gcctga
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