Dyella japonica: HY57_11730
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Entry
HY57_11730 CDS
T03215
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dja
Dyella japonica
Pathway
dja03410
Base excision repair
dja03430
Mismatch repair
dja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HY57_11730
03430 Mismatch repair
HY57_11730
03440 Homologous recombination
HY57_11730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dja03400
]
HY57_11730
DNA repair and recombination proteins [BR:
dja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HY57_11730
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HY57_11730
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HY57_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AIF47885
UniProt:
A0A075K225
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All DBs
Position
2760911..2762644
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AA seq
577 aa
AA seq
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MARERPVKRVSLRRREAVGVPTGWGADVHPVVQQVFAARGVLSPSDAEYRLARLLSPQQL
GGVDRAVALLSEAIRDNWSILIAGDYDCDGATGTAVAVRGLRMLGARNVDYVVPNRFVHG
YGLSPALVESLEPTPQLIVTVDNGVASIAGVAAAHARGTRVIVTDHHLPGEQLPAADAMV
NPNLGGDTFPSKALAGVGVMFYLLLALRASLREQGVFAAGSEPDLSVLLDLVAVGTVADL
VPLDYNNRVLVEAGMRRVRSGRGHAGVMALVEASQRSAATLCASDLGYAIGPRLNAAGRL
EDMRIGVECLLTDDPMQARRYAELLSSINQERRELQAAMVAEAEVMVSRAADIDAVGVAL
FEPSWHAGVVGLVASKLKERLHRPVIAFAPASEDQPEELRGSARSIAGFHIRDALVMIDA
RHPGLIARFGGHAMAAGLSLKTEDYPRFAAAFDAIAREWLDEDHLQAVQNTDGELPPGAA
TLELARQLRAAGPWGQAFPEPVFDNLFECASWRVMGERHLRLSLRDPRDGSVHDAVMFNG
YEGAPPPVMLRAAYELVINDWQGRESARLLLRYMEPA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ctggcgcgggagcggcccgtgaagcgggtcagcctgcgtcggcgtgaggccgtgggcgtg
cccacggggtggggtgcagacgtccatcctgttgtgcagcaggtgttcgcggcgcggggc
gtgctctcgccgtccgatgcggagtaccgcctcgcacgcctgttgtcgccacaacagctg
ggcggcgtcgatcgcgcggtcgcgttgttgtcggaggcgattcgcgacaactggtccatc
ctgatcgccggtgactacgactgcgacggagccaccgggactgccgtcgccgtgcgtgga
ctacgcatgctcggtgcgcgaaacgtggattacgtggtgcccaatcgcttcgtgcatggc
tacggcctcagccctgcgctggtggagtcgctggagccaacgccacagttgatcgtcacc
gtggacaatggtgtcgcgagcatcgccggcgtcgccgccgcgcatgcgcgtggcacgcgc
gtcatcgtgaccgaccaccatctgcccggcgaacagttgccggccgctgatgcgatggtc
aatcccaatctcggcggcgatacctttccgagcaaggcgctggccggcgtgggcgtgatg
ttctacctgctgttggccctgcgtgcctcgctgcgcgagcagggtgtgtttgcggcgggt
agtgaaccggatctctcggtgctgctcgacctggtggccgtgggtacggtcgccgacctg
gtgccgctggactacaacaatcgcgtgctggtggaagccggcatgcggcgcgtgcgcagc
ggtcgcggccatgcgggcgtgatggcgctggtggaggcaagccagcgtagtgccgccacc
ttgtgtgcaagcgacctgggctacgccatcgggccacggctgaacgccgccggtcgactc
gaagacatgcgcatcggcgtcgagtgcctgctgaccgacgatccaatgcaggcgcgccgc
tacgccgaactgctcagctcgatcaaccaggagcgtcgtgagctgcaggccgccatggtg
gcggaggccgaagtgatggtatcgcgcgcagccgatatcgatgcggtgggcgtggccttg
ttcgagccgagctggcacgccggtgtagtggggctggtggcgtcgaagctgaaggaacgg
ttgcatcggccggtgatcgccttcgcgccagccagtgaggatcagccggaggaattgcgc
ggctccgcgcgttccattgccgggttccatatccgcgatgcgctggtgatgatcgatgca
cgccatcctggccttatcgcgcgcttcggcggtcacgccatggcggcgggcctcagcctg
aagacggaagactatccgcgttttgcggcggcctttgacgccattgcgcgcgaatggctg
gacgaggaccacctgcaggccgtgcagaacacggatggcgagctgcccccgggcgccgcg
acgctggagctggcccgccagctgcgtgccgctgggccctggggacaggcttttcccgag
ccggtattcgacaacctgttcgaatgcgcgagctggcgcgtcatgggtgaacgacacctg
cgcctgagcctgcgtgatccgcgcgatggctccgtgcatgacgcggtgatgttcaatggc
tacgaaggtgcgccaccgcccgtcatgctgcgtgctgcctatgagctcgtcatcaacgac
tggcaaggacgcgagagcgcgcgtttgctgctgcggtacatggagcccgcctaa
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