Dyella japonica: HY57_17355
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Entry
HY57_17355 CDS
T03215
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
dja
Dyella japonica
Pathway
dja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HY57_17355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dja03400
]
HY57_17355
Enzymes [BR:
dja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HY57_17355
DNA repair and recombination proteins [BR:
dja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HY57_17355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_25
AAA_22
AAA_11
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIF48882
UniProt:
A0A075K5C8
LinkDB
All DBs
Position
4034176..4037838
Genome browser
AA seq
1220 aa
AA seq
DB search
MNATAPLQPLKLPLHGIQLIEASAGTGKTWTIAALYLRLVLGHGAPEGKALLPSQILVLT
FTKAATAELRERIRERLGEAADVFRGRREPDDYLRDLMAVYPDDDARARAARQLDLAAQW
MDESAIHTIHAWCQRMLGQHAFDSGHPFVQDTDTDESALLADTVRDYWRCHFFPLNRDGA
ALVSRWWKTPADLQADLRPLLKQPPESLRLDGRSLPDAERVLGEFRQHVGAATAAEDQAR
SRWLADVDAIETLFAQALDAGALNGTKMRREKVQDELAVLRAWAATGADASAALPRYTRS
ALAAAKNKSAQALQHPAFDAIEACVEAQGIVAPWRAPVLAHATRWVAAKLEETKQRRSQL
GFDDMLKRLDGALHGHTGKRLAETIALQYPMALIDEFQDTDPLQWRIFHRVYGRRDTTGL
LLIGDPKQAIYGFRGADIHTYLRARGSAQQPMWTLGTNYRSTTPLVEAVNRVFEFADTHD
DGAFAFGRGKDALPFHAVAARGRGDRLELDGQPLPPMQFALQQGDDALSTAAYTDVMARH
AAAYLVELLTAAQEGRCGFRGADGALRPLQPGDIAILVRRGAEASKVREEMQRRGLKSVY
LSDRDSVYASPEAADLLRWLRACAEPGSDRTMRAALATPTLGQSDAELDQLNLDEHHWEA
CGDRFRQLHATWQRHGVLAMLHDLLHAFDLPARLLARPDGERALTNLLHLAELLQHAAAT
LDGEHALIRHLAAQMAAAGDPQSDTADEQIVRLESEAKLIKVVTIHKSKGLEYPLVLLPF
ICSARELKADDSFTWHDDDGELRMDLRASDAALAQADRERLQEDLRLLYVALTRAQYACW
LGVACTRAGQGKAATLHKSAFGYVLSGGTKIEPADLMPRLEALRGDEPGMALHTLDAPAV
HRLPTAQTDATPLWEARIYQGPAAERWRVSSYSGLKYADVEEARVPAPETAAQDTLIEAS
AEQPALPGSGAAAQGIHAFHAGAEAGTFLHDLLEWAADEGFAQTADDMPALEKEVARRCQ
RRGWQAHITLLTAWMGQLLRMPLALPDGARASLAQMSSHYAELEFWFEANQVDTLALDRL
VTAHTLDARPRLPLLAERINGLLKGFIDLVVEQQGRYYVIDYKSNKLGNDAGAYTAEAMR
DSILRERYDLQYALYTLALHRQLRARLPGYDYERHMGGVAYLYLRGVDDAGHGVHVERLP
KALVETMDRLFAHGERARVA
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgacggcaccgctccagccgctcaagcttccgctgcatggcatccagctgatc
gaggccagcgccggcaccggcaagacctggaccatcgctgcgctctacctgcgcctggtg
ctgggccacggtgcgccggaaggcaaggccctgctgccgtcgcagatcctggtgctcacc
tttaccaaggccgccaccgccgagctgcgcgagcgcatccgcgaacgactgggcgaagcg
gcggacgtgttccgcggccgtcgcgagccggatgactacctgcgcgacttgatggccgtc
tatcccgacgacgacgcccgcgcgcgggcggcgcgacagctggatctggccgcgcaatgg
atggacgagtcggccatccacaccatccacgcctggtgccagcgcatgctgggccagcat
gcgttcgacagcggccatccgttcgtgcaggacaccgatacggacgaaagcgcgctgctc
gccgataccgtgcgcgactactggcgctgccacttcttcccgctgaaccgcgacggcgcg
gcgctggtatcgcgctggtggaaaacaccggccgacctgcaggcggacctgcgcccgctg
ctgaagcagccgccggaaagcctgcgcctggacgggcgctccctgcccgatgccgaacgg
gtgctgggcgaattccgccagcacgtgggtgctgccaccgcggcggaagatcaggcgcga
agccgctggctcgccgatgtcgatgccatcgagaccctgttcgcgcaggcgctggatgcc
ggcgcgctcaacggcaccaagatgcgaagggagaaggtgcaggacgaactggccgtactc
cgcgcctgggccgccaccggcgccgatgcctccgccgccctgccccgctatacgcgctcc
gcgctggcggcggcgaagaacaagagcgcgcaagccctgcaacacccggccttcgacgcc
atcgaagcctgcgtggaagcgcagggcatcgtcgcgccatggcgtgcacccgtgctggcg
cacgccacgcgctgggtggcggcaaagctcgaggaaaccaagcagcgtcgctcgcagctg
ggcttcgacgacatgctcaagcgcctcgatggcgcgctgcacgggcataccggcaaacgc
ctggccgagaccatcgccctccagtatccgatggcgctgatcgacgagttccaggatacc
gacccgctgcagtggcgtatcttccatcgcgtgtacggacgccgtgacacaacgggcctg
ctgctgatcggcgatcccaagcaggcgatctacggcttccgcggcgcggacatccacacg
tatctgcgggcacgcggcagcgcgcagcagccgatgtggacgctgggcaccaactaccgt
tccaccacgccgctggtggaggcagtgaatcgcgtattcgaattcgccgacacgcatgac
gacggcgccttcgccttcggccgcggcaaggatgcactgccattccacgccgttgccgcc
cgtggccgcggcgaccggctggagctggacgggcaaccgctgccaccgatgcagttcgcg
ctacagcaaggcgacgacgcactcagcacggccgcctataccgacgtgatggcgcggcat
gccgccgcctacctggtggaactgctcacggcggcgcaggaaggacgctgcggtttccgt
ggcgccgacggtgcgctgcggccgttgcagccgggcgatatcgccatcctcgtgcgtcgc
ggcgccgaggcatcgaaggtgcgcgaggaaatgcagcggcgtggactcaagagcgtgtac
ctctccgatcgcgactcggtctatgcctcgcccgaagccgccgacctgctgcgctggctg
cgcgcctgcgccgaaccgggctcggaccgcaccatgcgcgccgcgctcgctacgccgaca
ctgggccagagcgatgcagagctggaccagctcaaccttgacgagcaccactgggaggcc
tgcggtgaccgcttccgccaattgcacgccacctggcagcgtcacggcgtgctcgccatg
ctgcacgacctgctgcatgccttcgacctgccggcgcggttgctcgcacgcccggacggc
gagcgtgcgctgaccaacctgctgcacctcgccgagctgttgcagcatgccgccgccacg
ctggatggcgagcacgcgctgatccgccatctcgccgcgcagatggccgccgccggcgac
ccgcaatcggacacggccgacgaacagatcgtgcgcctcgaaagtgaggcgaagctgatc
aaggtggtgaccatccacaaatccaagggcctggaatatccgctggtgctgctgcccttt
atctgctccgcgcgcgagctgaaggcggatgacagcttcacctggcacgacgacgacggc
gagctgcgcatggacctgcgcgcgagcgacgccgcgctcgcgcaggcagatcgcgaacgc
ctgcaggaagacctgcgcctgctctatgtcgccctgacccgcgcgcaatacgcgtgctgg
ctgggcgtggcctgcacacgcgccgggcaaggcaaggcagcgaccctgcacaaatcggcg
tttggttatgtgctgtccggcggcacgaagatcgagcccgcggacctcatgccaagactg
gaagccttgcgcggcgatgaacccggcatggcactccacacactggacgcaccggccgtg
cacaggctgcccaccgcacagaccgatgccacgccgctgtgggaagcacgtatctatcaa
ggccccgccgccgaacgctggcgcgtgtccagctatagcggtctgaagtacgccgacgtg
gaggaagcacgcgtgcccgcgccggagacggcagcacaggacacgctgatcgaagcgagc
gccgagcagcctgccctgccgggcagtggtgcggcggcgcaaggcatccacgcgttccac
gccggtgcggaagccggcaccttcctgcacgacctgctggagtgggccgccgacgagggc
ttcgcccagacggcggacgacatgccggcgctggaaaaggaagtcgcccgtcgctgccag
cggcgcggctggcaagcgcacatcaccctgctcacggcatggatgggccaattgttgcgc
atgccgctcgcgctgcccgatggcgcgcgcgcctcgctggcgcagatgtccagccactac
gccgaactggagttctggttcgaagcgaaccaggtcgatacgctggcgctggaccggctg
gtgacggcgcatacgctggacgcgcggccacgcctgccgctgctggccgagcgcatcaac
ggtttgctcaagggcttcatcgacctggtggtggagcaacagggtcgctattacgtgatc
gactacaagtccaacaagctgggcaacgatgccggggcgtacacggccgaggcgatgcgc
gactccatcctgcgcgaacgctacgacctgcagtacgcgctgtacacactggccctgcac
cgccagttgcgcgcccgcctgccgggttacgactacgagcgccatatgggcggcgtggcc
tacctgtatctgcgcggcgtggacgatgcaggccatggcgtgcacgtcgaacgcctgccg
aaggctcttgtcgaaacgatggatcgcctgtttgcccatggggagcgcgcccgtgtcgcc
tga
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