Dyella japonica: HY57_18285
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Entry
HY57_18285 CDS
T03215
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dja
Dyella japonica
Pathway
dja03030
DNA replication
dja03430
Mismatch repair
dja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HY57_18285
03430 Mismatch repair
HY57_18285
03440 Homologous recombination
HY57_18285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dja03032
]
HY57_18285
03400 DNA repair and recombination proteins [BR:
dja03400
]
HY57_18285
Enzymes [BR:
dja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HY57_18285
DNA replication proteins [BR:
dja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HY57_18285
DNA repair and recombination proteins [BR:
dja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HY57_18285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
AIF49055
UniProt:
A0A075K4L5
LinkDB
All DBs
Position
4236632..4240189
Genome browser
AA seq
1185 aa
AA seq
DB search
MSVRFAHLHLHSEYSLVDSTIRIKGLVDACVRQGIPAVALTDDSNMFALVKFYKACSAAG
IKPIGGVDLWVSAPDDPRPWRLTLLIQNHAGYLNLSRMVSRAWRDGQHSGRAMVDASWLT
PEATNGLIAVLGRDSEAARIAVNQGVDVAAARLRPFAMQMADRLYLELTRTGREGEENWN
AAALGLAAQLELPVIASNDVRFLKQEGFESHEARVCINQGRVLADPKRPRDYSDQQYLKS
PEDMEALFADLPEALENTIELAKRCTLELSFGTYYLPDFPVPEGHDLASYIREISREGLK
ERLEFAGVAPGRTREEYETRLERELDVIIKMGFPGYFLIVADFINWGKQNGIPVGPGRGS
GAGSLVAWVLKITDLDPIQFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGR
DHVSQIITYGSMAAKAVLRDSGRVLGMGYNAVDRIAKLIPARPLDLTLQCALGRSEKAKK
EPDRIVKDFCDLYDQDEEARTLIDLALSLESITRGVGKHAGGVVIGPKPLTEFAPLYCEP
GGAGVVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINARRAVNGEEELNIAAIATD
DPAAYDLLKKAQTVAVFQLESSGMQRMLKDAKPDRFEDIIALVALYRPGPMDLIPSFVAR
KHGREEVVYPDPRVEPILKETYGIMVYQEQVMQMAQIVGGYSLGGADLLRRAMGKKKLEE
MAKERAKFREGAAKDGLTGEKADEIFDLMEKFAGYGFNKSHAAAYALVSYHTAWLKAHYP
AEFMAATISSDMDNTDKAVTFIDESKAIGLKVLPPDVNASEFMFVAVEPKVIRYGLGAIK
GVGQGACEAIADERKRGGAYKDLADFCRRVDSTKLNRRVLEALILSGSLDALAPNRASLM
AQLPNAMKAADQHLKNKQSGQNDMFGAMMGATTATVEVELPVVTDWPLEQKLQGERDTLG
HYLSGHPTDPWKDELAQLSTCPLGEIAERYQPPKPRKSDGDDNRFRRGPDTPWTVAGMVT
AVRKRGDSDAFVRLEDGTGVIEVSFFGDLYLQIAPMLTRDQMLVVEGGLRIDDFSGGGFA
LRARSAYTLGDGCRRFARLLRLKLNGVNPGFIEDLRRTLSGYRGGRASVVLYGYHNAVAQ
ADLELGEEWRVDAIPELLRAIRAVPGVEAAKLRIVKTDDRPRGGD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccgcttcgctcatctccaccttcacagcgagtactcgctggtcgactcgacc
atccgtatcaagggactggtcgatgcctgcgtgcgccagggtattccggccgtcgcgctg
accgacgacagcaacatgttcgcgctggtgaagttctacaaggcctgcagcgcggccggc
atcaagccgatcggcggcgtcgacctgtgggtcagcgcgccggatgacccgcgtccctgg
cgcctcaccctgctcatccagaaccatgccggctacctcaacctgtcgcgcatggtgtcg
cgcgcctggcgcgacgggcagcacagcggccgcgccatggtcgatgcgtcgtggctcaca
cccgaggcgacgaatggcctgatcgcggtgctgggccgcgacagcgaagcggcacgcatc
gccgtcaaccagggtgtggatgtggccgccgcacggctgcgcccgttcgcgatgcagatg
gccgatcgcctctacctcgaactgacccgcaccggtcgcgagggcgaagagaactggaac
gccgccgcgctcggcctggccgcgcagcttgagctgccggtgatcgccagcaacgacgtg
cgcttcctgaagcaggaaggcttcgaatcgcacgaagcacgcgtgtgcatcaaccagggc
cgcgtactcgccgaccccaagcgcccgcgcgactacagcgaccagcaatacctgaagtcg
cccgaggacatggaggcgttgttcgccgaccttcccgaggcgctggaaaacaccatcgag
ctggccaagcgctgcacgctggaactgagcttcggcacgtattacctgccggacttcccg
gtgccggaaggccacgacctggccagctacatccgcgaaatctcccgcgaaggcctgaag
gagcgcctggaattcgccggcgtcgcgcctggccgcacgcgcgaggaatacgaaacgcgc
ctggaacgcgagctggacgtcatcatcaagatgggcttccccggctacttcctgatcgtg
gcggacttcatcaactggggtaagcagaacggtattcccgtgggccccggccgtggttcg
ggtgcgggctcgctggtggcgtgggtgctgaagatcaccgacctggacccgatccagttc
gacctgctgttcgagcgattcctcaatcccgaacgcgtgtcgatgcccgacttcgacatc
gacttctgcatggatcgccgcgacgaggtgatcgactacgtcgcgcgcaaatacggccgc
gaccacgtcagccagatcatcacctacggttcgatggcggcgaaggccgtgctgcgcgac
tccggccgcgtgctcggcatgggctacaacgcggtggatcgcatcgccaagctcattccc
gcgcgccccctcgacctcacgctgcaatgcgcgctgggtcgttcggagaaggcgaagaaa
gagccggaccgtatcgtcaaggatttctgcgatctctacgaccaggacgaagaagcgcgc
acgctgatcgacctggcgctgagcctggaaagcatcacccgcggcgtcggcaagcatgcc
ggtggcgtggtgatcggccccaagccgcttaccgaattcgcgccgctgtactgcgaaccg
ggtggcgcgggcgtcgtcacgcagtacgacaaggacgacgtagaagccgtcggcctggtg
aagttcgacttcctcggcctgcgcacgctgaccatcatcgactgggcagtcaaggccatc
aacgcgcggcgcgcggtgaatggtgaagaagaactcaacatcgccgccattgccaccgat
gacccggcggcgtacgacctgctgaagaaggcgcagaccgtcgccgtgttccagctcgaa
tcctcgggtatgcagcgcatgctcaaggatgcgaagcccgaccgtttcgaggacatcatc
gcgctggtggccctgtaccgccccggcccgatggacctgatccccagcttcgtcgcccgt
aagcacggccgcgaggaagtggtgtaccccgacccgcgcgtcgagccgatcctgaaagag
acctacggcatcatggtctatcaggagcaggtgatgcagatggcgcagatcgtgggcggt
tattcgctcggcggcgccgacttgctgcgccgcgcgatgggcaagaagaaactcgaggaa
atggcgaaggaacgcgccaagttccgcgagggcgccgccaaggacgggctcaccggcgag
aaggccgatgagatcttcgacttgatggagaagttcgcgggctacggcttcaacaagtcg
cacgccgccgcttacgcgctcgtttcgtaccacaccgcctggctgaaggcgcactacccc
gccgagttcatggccgcgacgatttcgtcggacatggacaacaccgacaaggcggtgacc
ttcatcgacgagtcgaaggcgatcggcctgaaggtgctgccgccggacgtgaacgcatcc
gagttcatgttcgtcgccgttgagccgaaggtaatccgctacggcctgggcgccatcaag
ggcgtgggccagggtgcgtgcgaggccattgccgacgagcgcaagcgcggtggcgcgtac
aaggatctcgccgacttctgccgtcgcgtggactccaccaagctcaatcgtcgcgtgctg
gaagcgctgattctttccggttcgctggacgcacttgcaccgaaccgcgccagcctgatg
gcccagctgccgaacgccatgaaggcggcggaccagcacctgaaaaacaagcagtccggc
cagaacgacatgttcggcgccatgatgggtgcgacgaccgccacggttgaagtcgaactg
ccggtcgtgaccgactggccgctggagcaaaagctgcagggcgagcgcgacacgctgggc
cactacctgtccggccatccgaccgacccgtggaaggatgagctggcgcagctctcgacc
tgtccgctaggcgagatcgccgagcgctaccaaccacccaagccacgcaagagcgacggc
gacgacaaccgcttccgccgcggcccggatacaccgtggacggtggccggcatggtcacc
gccgtgcgcaagcgtggtgacagcgacgccttcgtccgcctggaagacggcaccggcgtc
atcgaggtgagcttcttcggcgacctctacctgcagatcgcccccatgctcacgcgtgat
cagatgctggtggtggaaggtggcctgcgcatcgacgatttctccggtggcggcttcgcc
ctgcgcgcccgcagcgcctatacgctgggcgatggctgccgccgcttcgcgcgcctgctg
cgtttaaaactgaatggcgtgaatccggggttcatcgaagacctgcgtcgcacactctcc
ggctaccgcggcggacgcgccagcgtggtcctgtacggctaccacaatgccgtggcccag
gccgacctggagctgggtgaggagtggcgcgtggatgcgattccagagctgctgcgggct
atccgggctgttccgggggtggaggcggccaagctgcgcatcgtgaagacggacgaccgg
ccgcgcggcggcgactga
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