Dyella japonica: HY57_18425
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Entry
HY57_18425 CDS
T03215
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dja
Dyella japonica
Pathway
dja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HY57_18425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dja03021
]
HY57_18425
03400 DNA repair and recombination proteins [BR:
dja03400
]
HY57_18425
Enzymes [BR:
dja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HY57_18425
Transcription machinery [BR:
dja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HY57_18425
DNA repair and recombination proteins [BR:
dja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HY57_18425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AIF49081
UniProt:
A0A075K4G2
LinkDB
All DBs
Position
complement(4272106..4273104)
Genome browser
AA seq
332 aa
AA seq
DB search
MAVSSTSVLRPRGLSVEQLGANRAKVVVEPLERGFGHTLGNALRRVLLSSIPGSAIVEVE
IDGVLHEYTTLEGLQEDVIEVLLNLKDVAIRQHSGDEVTLTLSKKGKGVVTAGDIAVDHS
VEIINPEHVICHLTKDIALNMRLKVRRGVGYQPASARQHPDDEARPIGRLQLDASFAPVL
RVAYEVDAARVEQRTNLDKLVLDIETNGTIGAEDAVRKAAEILNDQLSVFGDFSRRESAT
DKAEKGGFDPLLLRPIDDLELTVRSANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLT
EIKDVLGGRGLALGMKLENWPPPGLSHGMQLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcgtcaactagcgtgctgcggcctcgcggcctcagcgtcgagcagctcggt
gccaaccgcgccaaggtggtggtggagccgctcgagcgtggttttggccacaccctgggc
aacgcgctgcgtcgcgtgctgctttcctcgatccctggctctgccatcgtcgaggtggaa
attgatggcgtgctgcacgaatacaccacgctggaaggactgcaggaggacgtgatcgaa
gtcctgctgaacctcaaggacgtggcgattcgccagcactcgggtgacgaagtcaccctg
accctgtccaagaagggcaagggcgtggtcaccgccggcgacatcgccgtcgaccactcg
gtggaaatcatcaaccccgagcatgtgatctgccacctgaccaaggacatcgcgctcaac
atgcgcctgaaggtgcgtcgcggcgtcggctaccagccggccagcgcgcgccagcatccg
gacgatgaagctcgtccgatcggtcgcctgcagctcgatgcctcgttcgcgccggtgctg
cgcgtggcttacgaagtggacgctgcccgtgtggaacagcgcaccaacctcgacaagctc
gtgctggacatcgaaaccaacggcaccatcggtgcggaagacgcggttcgcaaggccgcc
gagatcctcaacgaccagctgtcggtgttcggtgacttctcgcgtcgcgagagcgctacg
gacaaggcggagaagggcggtttcgacccgctgctgctccgtccgatcgacgacctggag
ctcaccgtgcgttcggctaactgtctgaaggccgagagcatctactacatcggcgacctg
gtgcagaagacggaagtcgaactgctcaagacgccgaacctcggcaagaagtccctgacc
gaaatcaaggacgtgctgggtggtcgtggtctggccctgggtatgaagctcgaaaactgg
ccgccgccgggcctgtcccacggcatgcagttgggctga
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