Dyella japonica: HY57_20985
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Entry
HY57_20985 CDS
T03215
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dja
Dyella japonica
Pathway
dja00550
Peptidoglycan biosynthesis
dja01100
Metabolic pathways
dja01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HY57_20985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HY57_20985
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dja01011
]
HY57_20985
Enzymes [BR:
dja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HY57_20985
Peptidoglycan biosynthesis and degradation proteins [BR:
dja01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HY57_20985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AIF49557
UniProt:
A0A075K7D0
LinkDB
All DBs
Position
complement(4817553..4819568)
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AA seq
671 aa
AA seq
DB search
MALRRRAIKDARGEATLFRVRAFVGFALILIGLGVLVARYQYLQVRRHDEFALRSENNRM
KPRAIPPARGLIYDRNGVLLADNVPAFRLEVVPEQVKDMQGMLSSLREVVPLDDGDLEAF
RKQLKQNRRFDSVPLKLHLTEDEIDRFAINRWRFPGVDVVPYLTRRYPYGPLFAHVVGYV
GRIDADDMNRLDQDRYKGTSHVGRSGLERSYEDMLHGEPGYELVEVNADGRVQRVLETHA
PTPGKNLYLSIDMRVQKAATDAFQGRPGSAVAIDPRNGQVLAMASVPSFDPNLFVNGISK
ADYTGYMTAEDKPLLNRALKSAYPPGSTVKPFLALGGLELGIRRPEDTVLSTGEFCIPGQ
QRCYRDDVRGGNGTVNMVRAIQLSTNTYFYKLALDMGIDRLANWMGSLGFGKKTGIDLLG
EAEGILPSPEWKATRSKYPWFKGETVIAGIGQGYWNVTALQLAHATATFAGHGTPYAPRL
VMATSAVKERPVPLPNTPAGPSLIRKPHDWDVVNQGMLAVVNEVGGTAKGQFTGFPYLVA
GKSGTAERFSRRSNEYDTNKNTAYLAARHRAWFIGYTPAEAPRIAVVAMLESGAWGASDA
GPIVRKVMEAWLASTGGPVPPKNPEGEPAAPSSAPDVPEDTPVVSPADMSTMPTVPADSA
SAAPPEDGGNP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcggcgacgcgccatcaaggatgcccgcggcgaagccacgctgttccgcgtg
cgcgccttcgtgggctttgcgctgatccttatcggcctgggcgtgctggtggcgcgttac
cagtacctgcaggtgcggcgccacgacgagttcgccctgcgctccgagaacaaccgcatg
aagccgcgcgccattccgcccgcgcgcggcctcatctacgaccgcaacggcgtgttgctg
gccgacaacgtgccggcgttccgtctggaagtggtgcccgagcaggtgaaggacatgcag
ggcatgctgtcctccctccgcgaggtcgtgccgctggacgacggcgacctcgaggccttc
aggaagcagctcaagcagaaccgccgtttcgacagcgtgccgctgaagctgcacctcacc
gaggatgagatcgaccggttcgccatcaaccgctggcgtttcccgggcgtggacgtggtg
ccctatctcacccgccgttacccgtacggccccctgttcgcgcacgtggtgggctatgtg
gggcgcatcgatgcggacgacatgaaccgcctcgaccaggatcgctacaagggcaccagc
cacgtcggtcgcagcggtctggagcgctcgtacgaggacatgctgcacggcgagcccggc
tacgagctggtcgaagtgaatgccgacggccgcgtgcagcgcgtgctggaaacccatgcg
cccacgccgggcaagaacctctacctgagcatcgacatgcgggtgcagaaggcggccacc
gatgccttccaggggcggccgggctccgcggtggccatcgatccgcgcaatggccaggtg
ctggccatggccagcgtgccgagcttcgaccccaacctgttcgtcaacggcatcagcaag
gcggactacacgggctacatgacggccgaggacaagccgttgctcaaccgcgcgctgaag
agcgcgtatccgccgggttcgacggtgaagccgttcctcgcgctgggtggtctggaactg
ggcatccgccgtccggaggacaccgtgctgtcgacgggcgaattctgtatcccgggccag
cagcgctgctatcgcgacgacgtgcgtggcggcaacggcacggtgaacatggtgcgagcc
atccagctctccaccaatacgtacttttacaagctcgcgctcgacatgggcatcgaccgg
ctggccaactggatgggtagcctgggcttcggcaagaagacggggatcgacctgctgggt
gaggccgaaggcattctgccgtcgccggagtggaaggccacgcgcagcaaatacccctgg
ttcaagggcgaaaccgtgatcgccggcatcggccagggttactggaacgtcaccgcgctg
cagctcgcccatgccacggccacctttgccggccacggcacgccgtatgcgccacggctg
gtaatggccacctccgccgtgaaggagcgcccggtgccattgcccaacacgcccgccggg
ccttcgctgatccgcaagccgcatgattgggatgtggtgaatcagggcatgctagccgtg
gtcaatgaggtgggcggtacggccaaggggcagttcaccggctttccgtaccttgtggcg
ggcaagagcggtaccgcggagcgtttctcccggcgtagcaacgaatacgacaccaacaag
aacaccgcctatctggccgcgcgccaccgcgcatggttcatcggttacacgcctgcagag
gccccccgcatcgccgttgtcgccatgctggaatcgggtgcgtggggcgcgtcggacgcc
ggccccatcgtgcgcaaggtgatggaagcatggctagcctcgaccggcggtcccgtgccg
ccgaagaacccggaaggcgagccggcggctccctccagcgcgccggacgtgcccgaagac
acgcccgtcgtctcgccagcggacatgtccaccatgccaacagtcccggccgacagcgcc
agcgccgcaccgcccgaggatggaggcaacccatga
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