Dyella jiangningensis: CH75_03245
Help
Entry
CH75_03245 CDS
T03074
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dji
Dyella jiangningensis
Pathway
dji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH75_03245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dji03019
]
CH75_03245
03009 Ribosome biogenesis [BR:
dji03009
]
CH75_03245
Enzymes [BR:
dji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CH75_03245
Messenger RNA biogenesis [BR:
dji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CH75_03245
Ribosome biogenesis [BR:
dji03009
]
Prokaryotic type
rRNA helicases
CH75_03245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
adh_short
Cas3-like_C_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AHX12432
LinkDB
All DBs
Position
complement(739839..741713)
Genome browser
AA seq
624 aa
AA seq
DB search
MSSPSSDSQPAAVGFAALGLHPELLRALADVGYESPSPIQAATIPPLLEGRDVLGQAQTG
TGKTAAFALPILSRIDLKPGKPQALILAPTRELAIQVAEAFQRYATYMPGLQVLPIYGGQ
SYGPQLHSLKRGVQIVVGTPGRVIDHLERGTLDLSELKFLVLDEADEMLRMGFIDDVEKV
LEATPPTRQVALFSATMPAPIRKIAQRHLKDPVEVTIKAATTTAANIRQRYWFVSGMHKL
DAMTRILEAEPFDAMIIFARTKQATEELAEKLQARGLAAAAINGDIAQAQRERVIQQLKD
GKLDILVATDVAARGLDVERISHVMNYDIPYDTESYVHRIGRTGRAGRSGEAILFVTPRE
KGMLRAIERATRQPIEEMKLPTVEAVNDVRIAKFKQRISDTLAVGELALFQQLIEQYEQE
HNIPAIEIAAALARIAQGNQPLLLTPPPKRERDQAPREREHGRERDTHEHRGEREHRSRD
RDAAPREFVARPVRPHHTEEGKRTYRIEVGHEHGVKPGNIIGAIANEAGLESGFIGRLSI
RGEYSLIDLPEGMPSEVFEHLKKVWVSQQQLRIKEWDGDDSGAGDAPPRKPGGFRPGGGG
FKKSHGGKPRPHGHGGGKPPRRGK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgtcttccgattcccagccggcagccgtcggctttgctgcgcttggcctt
catcccgagctgctgcgcgcactggccgacgtcggctacgagtcgccctcgccgatccag
gccgccaccattccgccgctgctggaaggccgcgacgtgctcggccaggcgcagaccggc
accggcaagaccgccgcgttcgcgctgcctatcctttcgcgcatcgacttgaagcccggc
aagccgcaggcgctgatcctcgcgcccacgcgcgagctggccatccaggtggccgaagcg
ttccagcgctacgcgacctacatgcccggcctgcaggtgctgccgatctacggcggccag
agctatggcccgcagctgcattcactcaagcgcggcgtgcagatcgtggtcggtacaccc
ggtcgcgtgatcgatcatctcgaacgcggcacgctcgatctgtcggaactgaagttcctg
gtgctcgatgaagccgacgaaatgctgcgcatgggcttcatcgacgacgtggaaaaggtg
ctggaggcgacgccgccgacccgccaggtcgcgctgttctccgcgaccatgccggccccg
atccgcaagatcgcgcagcggcacctgaaggacccggtggaggtgaccatcaaggccgcc
accaccaccgccgccaacatccgccagcgctactggttcgtcagcggcatgcacaagctc
gatgcgatgacccgcatcctcgaggccgagccgttcgacgcgatgatcatcttcgcgcgc
accaagcaggccaccgaagaactcgccgagaaattgcaggcgcgcggcctggccgccgcc
gcgatcaacggcgatatcgcgcaggcacagcgcgagcgcgtgatccagcagctgaaggac
ggcaagctggacatcctggtcgccaccgacgtggccgctcgcggcctcgacgtggagcgc
atcagccacgtcatgaactacgacatcccgtacgacacggaaagctatgtgcaccgcatc
ggccgcaccggtcgcgccggtcgcagcggcgaggcgatcctgttcgtcacgccgcgcgaa
aagggcatgctgcgtgcgatcgagcgcgccactcgccagccgatcgaagaaatgaagctg
ccgaccgtggaagcggtcaacgacgtgcgcatcgccaagttcaagcagcgcatcagcgac
acgctggccgtgggcgagctggcactgttccagcagctgatcgagcagtacgagcaggaa
cacaacattcccgcgatcgaaatcgccgccgcactggcgcgcatcgcccagggcaatcag
ccgctgctgctgacgccgccgcccaagcgcgaacgtgaccaggctccgcgcgaacgcgag
catggccgtgaacgcgacacgcacgagcaccgtggcgagcgcgaacatcgttcgcgtgat
cgcgacgctgcgccgcgcgaattcgtggcgcgccccgtgcgcccgcaccacaccgaggaa
ggcaagcgcacctatcgcatcgaggtgggccatgagcacggcgtgaagcctggcaacatc
atcggcgcgatcgccaatgaagcgggtctggaaagcggcttcatcggtcgcctgagcatc
cgcggcgaatacagcctgatcgacctgcccgaaggcatgccctcggaggtgttcgagcac
ctgaagaaggtatgggtgagtcagcaacagctgcgcatcaaggaatgggacggcgacgac
agcggcgccggcgacgcaccgccgcgcaagccgggcggtttccgtccgggcggcggtggc
ttcaagaagtcccacggcggcaagccgcgcccgcacggccacggtggcggcaagccgccg
cgtcgcggcaagtaa
DBGET
integrated database retrieval system
