Dyella jiangningensis: CH75_03270
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Entry
CH75_03270 CDS
T03074
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dji
Dyella jiangningensis
Pathway
dji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH75_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dji03019
]
CH75_03270
Enzymes [BR:
dji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CH75_03270
Messenger RNA biogenesis [BR:
dji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CH75_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AHX12437
LinkDB
All DBs
Position
complement(744678..745997)
Genome browser
AA seq
439 aa
AA seq
DB search
MSFESLGLAPALLRALAEQGYAEPTPIQAAAIPVVLEGGDLLAAAQTGTGKTAAFSLPLL
QHLSTAGATQTRRPRALVLTPTRELAAQVHDNLRDYGKHLRISSTTIFGGVSMGPQMQAL
RRGVDIVIATPGRLIDHMQQRSIDLSGVEVLVLDEADRMLDMGFLPALKRILAAVPRQRQ
TLLFSATFAPPIKALAMQFMHQPREVSVTPANSVATTVTHHVHPVDAAKKRDLLLHVLSQ
DSRRQTLVFSRTKHGADKLVKQLEMAGLRAAAIHGNKSQNARTRALSDFKTGRITVLVAT
DIAARGIDIDQLPIVINYDLPMVAEDYVHRIGRTGRAGADGMAVSLVSHEEAGLLRDIRK
LLKQDIAVSEVPGFEPSHPLRTDANAPKPVQGQRQPSQQRQARPQSSHRPHNNNHVHGSE
RPAEGNRKRRRQRRPAAKA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatcgctgggccttgcgcccgcgttgttgcgcgcgcttgccgaacagggc
tacgccgaacccactcccatccaggccgcggccattccggtcgtgctggaaggcggtgac
ctgctggccgccgcgcagaccggcactggcaaaaccgctgccttctcgctgccgttgctg
cagcatctttccaccgccggtgccacccagacgcgtcgtccgcgcgcgctggtgctgacc
ccgacccgcgaattggccgcccaggtgcacgacaacctgcgcgactacggcaagcacctg
cgcatcagcagcaccactatcttcggtggcgtgagcatgggcccgcagatgcaggccctg
cgtcgcggcgtggacatcgtcatcgccacgccgggccgtctcatcgaccacatgcagcag
cgctccatcgacctgtcgggcgtggaagtgctggtgctggatgaagccgaccgcatgctc
gacatgggctttttgcccgcactcaagcgcatcctcgcggccgtgccgcgccagcgccag
acgctgctgttctccgcgacgttcgcgccgccgatcaaggcgctcgccatgcagttcatg
catcagccgcgcgaagtgtcggtgacgccagccaattcggtggccacgacggttacgcat
catgtgcatccggtcgatgctgccaagaagcgcgacctgctgctgcacgtgctttcgcag
gacagccgtcgccagaccctggtgttcagccgcaccaagcatggcgccgacaagctggtg
aagcagctggaaatggcaggcctgcgcgccgcggccatccatggcaacaagagccagaac
gcgcgcacgcgtgcgctcagcgacttcaagaccggccgcatcaccgtgctggtcgccacc
gatatcgcggcgcgcggcatcgacatcgaccagctgccgatcgtgatcaactacgacctg
ccgatggtcgccgaagactacgtgcaccgcatcggccgcaccggtcgtgcgggcgccgac
ggcatggccgtgtcgctggtaagccacgaggaagccggcctgctgcgcgatatccgcaag
ctgctcaagcaggacatcgcggtgagcgaagtgccaggcttcgagccgtcgcatccgctg
cgcaccgacgccaacgcgccgaagccggtgcagggccagcgccagccgagccagcagcgc
caggctcgcccgcagagttcgcatcgcccgcacaacaacaaccatgtgcacggcagcgag
cgcccggccgaaggtaatcgcaagcgtcgtcgccagcgccgccccgccgccaaggcgtga
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