KEGG   Dyella jiangningensis: CH75_03270
Entry
CH75_03270        CDS       T03074                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
dji  Dyella jiangningensis
Pathway
dji03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dji00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CH75_03270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dji03019]
    CH75_03270
Enzymes [BR:dji01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CH75_03270
Messenger RNA biogenesis [BR:dji03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CH75_03270
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 Flavi_DEAD UvrD-helicase
Other DBs
NCBI-ProteinID: AHX12437
LinkDB
Position
complement(744678..745997)
AA seq 439 aa
MSFESLGLAPALLRALAEQGYAEPTPIQAAAIPVVLEGGDLLAAAQTGTGKTAAFSLPLL
QHLSTAGATQTRRPRALVLTPTRELAAQVHDNLRDYGKHLRISSTTIFGGVSMGPQMQAL
RRGVDIVIATPGRLIDHMQQRSIDLSGVEVLVLDEADRMLDMGFLPALKRILAAVPRQRQ
TLLFSATFAPPIKALAMQFMHQPREVSVTPANSVATTVTHHVHPVDAAKKRDLLLHVLSQ
DSRRQTLVFSRTKHGADKLVKQLEMAGLRAAAIHGNKSQNARTRALSDFKTGRITVLVAT
DIAARGIDIDQLPIVINYDLPMVAEDYVHRIGRTGRAGADGMAVSLVSHEEAGLLRDIRK
LLKQDIAVSEVPGFEPSHPLRTDANAPKPVQGQRQPSQQRQARPQSSHRPHNNNHVHGSE
RPAEGNRKRRRQRRPAAKA
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgtctttcgaatcgctgggccttgcgcccgcgttgttgcgcgcgcttgccgaacagggc
tacgccgaacccactcccatccaggccgcggccattccggtcgtgctggaaggcggtgac
ctgctggccgccgcgcagaccggcactggcaaaaccgctgccttctcgctgccgttgctg
cagcatctttccaccgccggtgccacccagacgcgtcgtccgcgcgcgctggtgctgacc
ccgacccgcgaattggccgcccaggtgcacgacaacctgcgcgactacggcaagcacctg
cgcatcagcagcaccactatcttcggtggcgtgagcatgggcccgcagatgcaggccctg
cgtcgcggcgtggacatcgtcatcgccacgccgggccgtctcatcgaccacatgcagcag
cgctccatcgacctgtcgggcgtggaagtgctggtgctggatgaagccgaccgcatgctc
gacatgggctttttgcccgcactcaagcgcatcctcgcggccgtgccgcgccagcgccag
acgctgctgttctccgcgacgttcgcgccgccgatcaaggcgctcgccatgcagttcatg
catcagccgcgcgaagtgtcggtgacgccagccaattcggtggccacgacggttacgcat
catgtgcatccggtcgatgctgccaagaagcgcgacctgctgctgcacgtgctttcgcag
gacagccgtcgccagaccctggtgttcagccgcaccaagcatggcgccgacaagctggtg
aagcagctggaaatggcaggcctgcgcgccgcggccatccatggcaacaagagccagaac
gcgcgcacgcgtgcgctcagcgacttcaagaccggccgcatcaccgtgctggtcgccacc
gatatcgcggcgcgcggcatcgacatcgaccagctgccgatcgtgatcaactacgacctg
ccgatggtcgccgaagactacgtgcaccgcatcggccgcaccggtcgtgcgggcgccgac
ggcatggccgtgtcgctggtaagccacgaggaagccggcctgctgcgcgatatccgcaag
ctgctcaagcaggacatcgcggtgagcgaagtgccaggcttcgagccgtcgcatccgctg
cgcaccgacgccaacgcgccgaagccggtgcagggccagcgccagccgagccagcagcgc
caggctcgcccgcagagttcgcatcgcccgcacaacaacaaccatgtgcacggcagcgag
cgcccggccgaaggtaatcgcaagcgtcgtcgccagcgccgccccgccgccaaggcgtga

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