KEGG   Dyella jiangningensis: CH75_04295
Entry
CH75_04295        CDS       T03074                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
dji  Dyella jiangningensis
Pathway
dji03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dji00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CH75_04295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dji03400]
    CH75_04295
DNA repair and recombination proteins [BR:dji03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CH75_04295
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CH75_04295
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_23 DnaJ_CXXCXGXG AAA_21 AAA_25 RsgA_GTPase DUF4350 NACHT nSTAND3
Other DBs
NCBI-ProteinID: AHX12632
LinkDB
Position
complement(948722..951625)
AA seq 967 aa
MDTIRIRGARTHNLKNIDLDLPRDRLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGTPRC
PDHGIPLEAQTVSQMVDSTLALDPEKRFMLLAPVIRERKGEHVQVFDQLRAQGFVRARVD
GTVYDLDAVPPLTLRQKHSIEVVVDRFRPRDDIKQRLAESFETALRLGDGLVILADMDDA
KAPEQLLSSRYSCPVCDYSLPELEPRLFSFNSPIGACPSCDGLGVTQVFDPARVVAHPEL
SLAGGAIRGWDRRNAHYFQLIMSLAAHYKFDVDTPWRKLPTDVQKAILYGSGKDRIAFKY
LTERGGRVTREHPFEGILPNMERRYKETESPAVREELAKYISDQPCPECSGQRLNRSARN
VFVADHALPSLTSRSIDDALAFFEGLKLTGWRGEIAVKIVKEIRERLSFLNDVGLNYLTL
DRQADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNT
VIVVEHDEDAIRMADYILDIGPGAGVHGGEVVAQGALKDILSSSSSVTGQYLSGKRGIKV
PTERRQQLDADSWLHLKGASGNNLKNVDLAVPAGLFTCVTGVSGSGKSTLVNDTLFRLAA
AELNGSSEQPAPYKSVEGLELFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVPE
ARARGYTPGRFSFNVRGGRCEACEGDGMIKVEMHFLPDVYVPCDVCHGKRYNRETLEVHY
KGHTIADVLDMTVEDALKLFENVPTIARKLETLRAVGLDYIKLGQSATTLSGGEAQRVKL
SKELSKRDTGRTLYILDEPTTGLHFHDIEQLLDVLHQLVEQGNTVVVIEHNLDVIKTADW
LVDLGPEGGAGGGRILVTGTPEQVAATPGSHTGRFLAPHLDVKPAKSAKAKAESNGKSKP
ALRKKTA
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggacaccatccgcatccgcggtgcgcgcacgcacaacctcaagaacatcgacctggat
ctgccgcgtgaccggctgatcgtgatcacgggcctgtcaggctccggcaaatcctcgttg
gccttcgacaccatctacgccgaaggccagcgccggtacgtcgaatcgctgtcggcctac
gcaaggcaattcctctcgatgatggaaaagccggacgtcgatcacatcgaaggtctttcg
ccggccatttccatcgagcagaagtccacctcgcacaacccgcgctccaccgtgggcacg
atcaccgaggtctacgactatctgcgcctgctgtatgcccgcgtgggtacgccgcgctgc
cccgaccacggcattccgctggaggcgcagacggtcagccagatggtcgacagcacgctg
gcgctcgatcccgagaagcgcttcatgctgcttgccccggtgatccgcgagcgcaagggc
gagcacgtgcaggtgttcgaccagctgcgcgcgcagggtttcgtgcgcgcgcgtgtcgac
ggcaccgtgtacgacctcgacgccgtgccgccgctcacgctgcgccagaagcacagcatc
gaagtggtggtcgatcgcttccgtccgcgcgatgacatcaagcagcgcctggccgaatcg
ttcgagaccgccctgcgcctgggcgatggcctggtgatcctggccgacatggacgacgcc
aaggcgccggaacaattgctgtcctcgcgctactcctgcccggtatgcgattactcgcta
cccgagctggaaccccgcttgttctcgttcaactcgccgatcggcgcctgcccgtcctgc
gacggcctgggcgtgacgcaggtgttcgatccggcgcgcgtcgtcgcgcatccggagctt
tcgctggccggcggcgccatccgcggctgggatcgccgcaacgcgcattatttccagctg
atcatgtcgctggctgcccattacaagttcgacgtggatacaccgtggcgcaagctgccg
acggacgtccagaaggccatcctgtacggcagcggcaaggatcgcatcgcgttcaagtac
ctcaccgaacgcggcggtcgcgtcacgcgcgagcatccgttcgaaggcatccttccgaac
atggagcgtcgctacaaggaaaccgaatctcccgccgtgcgtgaggagctggccaagtac
atcagcgaccagccctgccccgagtgctccggccagcgcctgaatcgttcggcacgcaat
gtgttcgtggccgaccacgcgctgccgtcgctcacctcgcgttccatcgacgacgcactc
gcctttttcgaaggcctgaagctcaccggctggcgcggcgagatcgcggtgaagatcgtc
aaggagatccgcgagcgcctgtcgttcctcaacgatgtgggcctcaattacctcacgttg
gaccgccaggccgattcgttgtccggcggcgaagcgcagcgcattcgtctcgcctcgcag
atcggcgccggcctggtcggcgtgatgtacgtgctcgacgagccatcgatcggcctgcac
cagcgcgacaacgagcgcctgctcggcacgctgacgcgattgcgcgacctcggcaacacg
gtgatcgtggtcgagcacgatgaagacgccatccgcatggctgattacatcctcgacatc
ggtccgggcgcgggcgtgcacggcggcgaagtcgtggcgcagggcgcactgaaggacatc
ctgtcctcgtccagctccgttaccggccaatacctgtcgggcaagcgtggcatcaaggta
cctaccgagcgccgccagcagctggatgccgattcctggttgcacctcaagggcgccagc
ggcaacaacctgaagaatgtcgatctcgcggttccggcgggtcttttcacctgcgtcacc
ggcgtgtccggctcgggcaagtcgacgctggtcaacgacacgctgttccgtcttgccgcc
gccgaattgaacggctccagcgagcagccggcaccgtacaagtccgtcgaaggcctggaa
ctgttcgacaaggtggtggacatcgaccagtcgccgatcggccgcacgccgcgctcgaac
ccggccacctacacgggtctgttcacgccgctgcgcgaactgtttgcgcaggtgcccgaa
gcgcgtgcgcgcggctatacgccgggccgcttcagcttcaacgtgcgcggcggtcgctgc
gaagcctgcgagggcgacggcatgatcaaggtggagatgcactttcttccggacgtgtac
gtgccttgcgatgtgtgccacggcaagcgctacaaccgcgaaacgctggaagtgcactac
aagggtcacaccatcgccgacgtgctggacatgacggtggaggatgcgctgaagctgttc
gaaaacgtgccgaccattgcgcgcaagctcgaaacgctgcgtgccgtgggcctggattac
atcaagctcggccagagcgcgacgacgctctcgggcggcgaagcgcagcgcgtgaagctg
tccaaggaattgtccaaacgcgatacggggcgcacgctgtacatcctcgacgagccgacc
accggcctgcacttccacgacatcgagcagctgctcgacgtgctccaccagctggtggaa
cagggcaacaccgtggtggtgatcgagcataatctggacgtgatcaagaccgccgactgg
ctggtcgatctcggcccggaaggcggcgccggcggcggtcgcatcctggtcaccggtacg
ccggaacaggtcgcagccacgccgggttcgcacaccggacgtttccttgccccccacctc
gacgtgaagcccgccaagtcggccaaggccaaggccgagagcaacggcaagagcaaacct
gcactacggaagaagactgcatga

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