Dyella jiangningensis: CH75_04295
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Entry
CH75_04295 CDS
T03074
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
dji
Dyella jiangningensis
Pathway
dji03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH75_04295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dji03400
]
CH75_04295
DNA repair and recombination proteins [BR:
dji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH75_04295
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CH75_04295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_23
DnaJ_CXXCXGXG
AAA_21
AAA_25
RsgA_GTPase
DUF4350
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHX12632
LinkDB
All DBs
Position
complement(948722..951625)
Genome browser
AA seq
967 aa
AA seq
DB search
MDTIRIRGARTHNLKNIDLDLPRDRLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGTPRC
PDHGIPLEAQTVSQMVDSTLALDPEKRFMLLAPVIRERKGEHVQVFDQLRAQGFVRARVD
GTVYDLDAVPPLTLRQKHSIEVVVDRFRPRDDIKQRLAESFETALRLGDGLVILADMDDA
KAPEQLLSSRYSCPVCDYSLPELEPRLFSFNSPIGACPSCDGLGVTQVFDPARVVAHPEL
SLAGGAIRGWDRRNAHYFQLIMSLAAHYKFDVDTPWRKLPTDVQKAILYGSGKDRIAFKY
LTERGGRVTREHPFEGILPNMERRYKETESPAVREELAKYISDQPCPECSGQRLNRSARN
VFVADHALPSLTSRSIDDALAFFEGLKLTGWRGEIAVKIVKEIRERLSFLNDVGLNYLTL
DRQADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNT
VIVVEHDEDAIRMADYILDIGPGAGVHGGEVVAQGALKDILSSSSSVTGQYLSGKRGIKV
PTERRQQLDADSWLHLKGASGNNLKNVDLAVPAGLFTCVTGVSGSGKSTLVNDTLFRLAA
AELNGSSEQPAPYKSVEGLELFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVPE
ARARGYTPGRFSFNVRGGRCEACEGDGMIKVEMHFLPDVYVPCDVCHGKRYNRETLEVHY
KGHTIADVLDMTVEDALKLFENVPTIARKLETLRAVGLDYIKLGQSATTLSGGEAQRVKL
SKELSKRDTGRTLYILDEPTTGLHFHDIEQLLDVLHQLVEQGNTVVVIEHNLDVIKTADW
LVDLGPEGGAGGGRILVTGTPEQVAATPGSHTGRFLAPHLDVKPAKSAKAKAESNGKSKP
ALRKKTA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatccgcatccgcggtgcgcgcacgcacaacctcaagaacatcgacctggat
ctgccgcgtgaccggctgatcgtgatcacgggcctgtcaggctccggcaaatcctcgttg
gccttcgacaccatctacgccgaaggccagcgccggtacgtcgaatcgctgtcggcctac
gcaaggcaattcctctcgatgatggaaaagccggacgtcgatcacatcgaaggtctttcg
ccggccatttccatcgagcagaagtccacctcgcacaacccgcgctccaccgtgggcacg
atcaccgaggtctacgactatctgcgcctgctgtatgcccgcgtgggtacgccgcgctgc
cccgaccacggcattccgctggaggcgcagacggtcagccagatggtcgacagcacgctg
gcgctcgatcccgagaagcgcttcatgctgcttgccccggtgatccgcgagcgcaagggc
gagcacgtgcaggtgttcgaccagctgcgcgcgcagggtttcgtgcgcgcgcgtgtcgac
ggcaccgtgtacgacctcgacgccgtgccgccgctcacgctgcgccagaagcacagcatc
gaagtggtggtcgatcgcttccgtccgcgcgatgacatcaagcagcgcctggccgaatcg
ttcgagaccgccctgcgcctgggcgatggcctggtgatcctggccgacatggacgacgcc
aaggcgccggaacaattgctgtcctcgcgctactcctgcccggtatgcgattactcgcta
cccgagctggaaccccgcttgttctcgttcaactcgccgatcggcgcctgcccgtcctgc
gacggcctgggcgtgacgcaggtgttcgatccggcgcgcgtcgtcgcgcatccggagctt
tcgctggccggcggcgccatccgcggctgggatcgccgcaacgcgcattatttccagctg
atcatgtcgctggctgcccattacaagttcgacgtggatacaccgtggcgcaagctgccg
acggacgtccagaaggccatcctgtacggcagcggcaaggatcgcatcgcgttcaagtac
ctcaccgaacgcggcggtcgcgtcacgcgcgagcatccgttcgaaggcatccttccgaac
atggagcgtcgctacaaggaaaccgaatctcccgccgtgcgtgaggagctggccaagtac
atcagcgaccagccctgccccgagtgctccggccagcgcctgaatcgttcggcacgcaat
gtgttcgtggccgaccacgcgctgccgtcgctcacctcgcgttccatcgacgacgcactc
gcctttttcgaaggcctgaagctcaccggctggcgcggcgagatcgcggtgaagatcgtc
aaggagatccgcgagcgcctgtcgttcctcaacgatgtgggcctcaattacctcacgttg
gaccgccaggccgattcgttgtccggcggcgaagcgcagcgcattcgtctcgcctcgcag
atcggcgccggcctggtcggcgtgatgtacgtgctcgacgagccatcgatcggcctgcac
cagcgcgacaacgagcgcctgctcggcacgctgacgcgattgcgcgacctcggcaacacg
gtgatcgtggtcgagcacgatgaagacgccatccgcatggctgattacatcctcgacatc
ggtccgggcgcgggcgtgcacggcggcgaagtcgtggcgcagggcgcactgaaggacatc
ctgtcctcgtccagctccgttaccggccaatacctgtcgggcaagcgtggcatcaaggta
cctaccgagcgccgccagcagctggatgccgattcctggttgcacctcaagggcgccagc
ggcaacaacctgaagaatgtcgatctcgcggttccggcgggtcttttcacctgcgtcacc
ggcgtgtccggctcgggcaagtcgacgctggtcaacgacacgctgttccgtcttgccgcc
gccgaattgaacggctccagcgagcagccggcaccgtacaagtccgtcgaaggcctggaa
ctgttcgacaaggtggtggacatcgaccagtcgccgatcggccgcacgccgcgctcgaac
ccggccacctacacgggtctgttcacgccgctgcgcgaactgtttgcgcaggtgcccgaa
gcgcgtgcgcgcggctatacgccgggccgcttcagcttcaacgtgcgcggcggtcgctgc
gaagcctgcgagggcgacggcatgatcaaggtggagatgcactttcttccggacgtgtac
gtgccttgcgatgtgtgccacggcaagcgctacaaccgcgaaacgctggaagtgcactac
aagggtcacaccatcgccgacgtgctggacatgacggtggaggatgcgctgaagctgttc
gaaaacgtgccgaccattgcgcgcaagctcgaaacgctgcgtgccgtgggcctggattac
atcaagctcggccagagcgcgacgacgctctcgggcggcgaagcgcagcgcgtgaagctg
tccaaggaattgtccaaacgcgatacggggcgcacgctgtacatcctcgacgagccgacc
accggcctgcacttccacgacatcgagcagctgctcgacgtgctccaccagctggtggaa
cagggcaacaccgtggtggtgatcgagcataatctggacgtgatcaagaccgccgactgg
ctggtcgatctcggcccggaaggcggcgccggcggcggtcgcatcctggtcaccggtacg
ccggaacaggtcgcagccacgccgggttcgcacaccggacgtttccttgccccccacctc
gacgtgaagcccgccaagtcggccaaggccaaggccgagagcaacggcaagagcaaacct
gcactacggaagaagactgcatga
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