Dyella jiangningensis: CH75_04400
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Entry
CH75_04400 CDS
T03074
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
dji
Dyella jiangningensis
Pathway
dji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CH75_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dji03400
]
CH75_04400
Enzymes [BR:
dji01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CH75_04400
DNA repair and recombination proteins [BR:
dji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH75_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_22
AAA_25
AAA_30
AAA_11
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AHX12647
LinkDB
All DBs
Position
complement(973295..976951)
Genome browser
AA seq
1218 aa
AA seq
DB search
MIASQSLQPLRLPLQGIQLIEASAGTGKTWTIAALYLRLVLGHGRPDGTPLLPSQILVLT
FTKAATAELRERIRERLGEAAQAFRDQADDDDFLRDLIASYPDQETRSRAARQLELAAQW
MDEAAIHTIHAWCQRMLSQHAFDSGHPFAQDTSADESELLAETVRDYWRTHFFPLDRAGA
ALVSRWWKAPADLQHALRPLLRQPLENLRLAGNPLPEPAEALAQFQQGVHATDTAEACAR
LAWSDGADAIEAMFARALAARALNGRKMPADNVAAQLVELREWSQGGPVSPDTLRRYSQE
ALTASLNKNAEPLRHAAFEAIAACIEQLQRLDTLKSTVLAQATRWVSQRLEQTKQRRAQM
GFDDMLRRLDAALHGISGARLADTIARQYPIALIDEFQDTDPLQWNIFRRIYDGRVGAGL
LLIGDPKQAIYGFRGADIHTYLRARDRASQPTWTLDTNYRSTGALVGAVNRVFEHADSHS
TGAFAFGRDALPFHAVKARGRSDRLVFDGQPLPPMQLALAGSNDAISGSAYTHLMAQHAA
AHVVQLLAAAQEDRCGFVDDACKLTPLRAGDIAILVRSGTEAAKVREEMQRRGLKSVYLS
DRDSVYASPEAVDLLRWLQACAMPGSDRAMRAALATPTLGQSDAELDRLNLDEHYWETCG
ERFRQLHDTWLRHGVLAMLHDLLHAFDLPARLLSRLDGERALTNLLHLAELLQHAAASLD
GEQALVRHLAAQMSMARDGQSDTAEDQIVRLESEDALIKVVTIHKSKGLEYPLVLLPFAC
ASREVKADDRFVWHGDDGEPRMDLRADTAAQAMADRERLQEDLRLLYVALTRARYACWLG
VACCKSGNSSTPSLHKSAFGYVLSGDAMIQPGDLLPRLQALRGDNRDIHIDALATPDTRP
FKAKATDVTPLWEARTFQGPPQERWWVASYSSLKLAENESPAPAPETASQDVRMEVESEP
PLLPASAPAIARGIHAFHAGAEAGTFLHDLLEWSADEGFAAVASDPAGLGKEIARRCQRR
GWQSDIALLSQWLPALLRMPLALPDGRSTSLAELDAYYAELEFWFEARHVDTLALDRLVT
RHTLDNLPRPSLQAEHINGLLKGFIDLVAERQGRYYVIDYKSNRLGGDADAYTASAMRDS
ILRERYDLQYALYTLALHRQLRARLPGYDYELHVGGVAYLYLRGVDGQGHGVHVERLPFE
LVEAMDRLFADGARSHAA
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgagccaatcgctgcagccgctgcgcctgccgctgcaaggcatccagctgatc
gaggccagcgccggcacgggcaagacctggaccatcgccgcactgtatttgcgcctggtg
cttggccacggacgtccagacggcacgccgctgcttccctcgcagattctcgtgctgacc
tttaccaaggcggcgaccgctgaacttcgtgagcgcatccgcgagcgtctcggtgaggcc
gcccaggcatttcgtgaccaggcagacgacgacgacttcctgcgcgacctgatcgcttcg
tatcccgatcaagagacccggtcgcgcgcggcgcgccagctcgaactcgccgcgcaatgg
atggacgaggcagccatccacaccatccacgcgtggtgccagcggatgctcagccagcat
gccttcgacagcggccatccgttcgcccaggacaccagcgctgacgaaagcgaactgctc
gccgaaaccgtgcgcgattactggcgaacgcatttctttccgctcgaccgcgccggcgcc
gccctggtctcgcgctggtggaaggcgcccgccgatttgcagcatgcgctgcgtcccttg
ttgcgccaacccctggagaatctgcggctcgcaggcaaccccttgcccgaaccggccgag
gcgttggcgcagttccagcaaggcgtgcatgcgacagatacggccgaggcatgtgcaagg
cttgcctggagcgacggcgcggacgccatcgaggccatgttcgccagggccttggccgcc
cgtgcgttgaacggcaggaagatgcccgccgacaacgtcgcggcacaacttgtcgagttg
cgtgaatggtcgcaaggcggccctgtctccccggacacattgcgacgctactcgcaggag
gcgttgacggcgtcgttgaacaagaatgccgaaccactgcggcatgcggcattcgaagcc
atcgctgcgtgtatcgaacaactgcaacgcctcgacactctgaaatccaccgtgctcgcg
caagcgacgcgctgggtatcgcaacgcctggaacagaccaagcagcgccgcgcgcagatg
ggtttcgacgacatgttgcgccggctcgatgctgcgttgcacggcatcagcggggctcgg
cttgccgacacgatcgcgaggcagtaccccatcgcgttgatcgacgaattccaggacacc
gaccccctgcagtggaacattttccgccgcatctacgacgggcgcgtcggcgcaggcttg
ctgctgatcggcgatcccaagcaggccatttatggtttccgtggcgcggacatccacact
tacctgcgagcgcgggaccgcgccagccagccgacctggacactcgacaccaactatcga
tccaccggggcgctggtcggcgcagtcaatcgcgtattcgaacatgccgactcgcattca
acgggtgcgtttgcgttcggccgcgatgcgctgccattccatgcggtaaaggcgcgcggc
cgcagcgatcgcctggtgttcgacggacagccccttccgcccatgcaattggccttggcc
gggagcaatgacgccatcagcggctcggcttatacccacctgatggcgcaacacgcagct
gcccatgtagtgcagctgttggcagccgcgcaggaggaccgttgcggcttcgtggatgat
gcgtgcaagctcacgccgcttcgcgcaggcgacatcgccatcctcgtgcgcagcggcacg
gaagcagccaaagtacgcgaggagatgcaacggcgcggcctcaagagcgtgtacctttcc
gaccgcgattcggtctatgcctcgcccgaggccgtcgatctgctgcggtggctgcaggca
tgcgccatgcccggctccgatcgcgcgatgcgcgcggcgcttgccacgcctacgctgggc
cagagcgatgcggagctggatcggctcaatctcgacgaacattactgggaaacgtgcggc
gagcgcttccgccagttgcatgacacctggcttcgccatggcgtactggccatgctgcat
gacctgctgcatgccttcgacctgcctgcccgcctgttgtcgcgcctcgatggcgagcga
gcgctgaccaacctcttgcacctggccgagctgctgcagcacgcggccgcgagcctcgac
ggcgaacaggcgctggtgcgccacctcgccgcgcagatgtccatggctcgcgatgggcaa
agtgacaccgccgaagaccagatcgtgaggctggaaagcgaggatgcgctgatcaaggtg
gtgaccatccacaagtccaagggactcgagtacccgctggtgcttctgccgttcgcatgt
gcctcacgcgaggtgaaggccgacgatcggttcgtgtggcacggcgacgacggcgaacca
cgcatggatcttcgtgcagataccgctgcgcaggccatggccgatcgtgaacgactgcag
gaagacctgcgcctgctctacgtcgcgctcacccgtgcgcgctatgcgtgctggctcggt
gtggcctgctgcaagagcggcaacagctcaacgccttcgctgcacaaatcggccttcggt
tacgtgctgtcaggcgatgccatgatccagccgggcgacctgcttccacggctgcaggcc
ttgcgcggcgacaaccgcgacatccatatcgatgccctggcaactcccgacacgcgtccg
ttcaaagcaaaggcaaccgacgtcacgccgttgtgggaagcacgtaccttccagggtccg
ccgcaggagcgctggtgggtcgcgagctacagttcgctcaagctggcggaaaacgaatcg
cctgccccggcaccggaaaccgcgtcgcaagatgtgcggatggaagttgagagcgagccg
ccattgttaccggcaagtgcgccggccatcgcaaggggcatccacgccttccatgccggc
gccgaagcaggcaccttcctgcacgacctgctcgagtggtcagccgatgagggctttgcc
gccgtggcgagcgatcctgccgggctgggcaaggaaatcgcacggcggtgccagcgccgc
ggctggcaatcggatatcgcgctgctctcgcagtggcttcctgctctgttgaggatgccg
ctggcgctgcccgatggcagatcgacgagtctcgccgaactcgatgcctattacgcggaa
ctcgagttctggttcgaggcgcgtcacgtcgacacgcttgcgctggatcgcctggtcacc
cggcatacgctggacaacttgccacgaccttcgctgcaggccgagcacatcaatggcctg
ctcaagggcttcatcgatctggtggcggagcgccagggacgttattacgtgatcgactac
aaatcgaaccgcctcggcggcgatgccgatgcgtatacggcctccgccatgcgcgactcc
atcctgcgcgagcgctacgacctgcagtacgcactctatacattggccctccatcggcag
ctgcgcgcccgcctgcccggctacgactacgagctgcacgtcggtggcgtggcctatctg
tacttgcgtggcgtcgacggccaagggcatggcgtgcatgtcgagcgattgccgttcgaa
ctcgttgaagcgatggaccgcctgtttgccgacggagcacgcagccatgcggcgtga
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