Dyella jiangningensis: CH75_11990
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Entry
CH75_11990 CDS
T03074
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dji
Dyella jiangningensis
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dji03009
]
CH75_11990 (rimO)
Enzymes [BR:
dji01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CH75_11990 (rimO)
Ribosome biogenesis [BR:
dji03009
]
Prokaryotic type
ribosomal protein modification factors
CH75_11990 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AHX13832
LinkDB
All DBs
Position
complement(2592140..2593459)
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AA seq
439 aa
AA seq
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MSQASPKVGFVSLGCPKALVDSERILTQLKVEGYEIVPSYGAADAVVVNTCGFIDAAVQE
SLDAIGEALHENGKVIVTGCLGKRSELIREAYPDVLAITGPQDYASVMTAVHSALPPKRN
PLLDIIPDTGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLVEAERLVK
GGVKELLVISQDTSAYGVDVKYAERQWRDKSYRTRMTELCEGLSELGVWTRLHYVYPYPH
VDEVMPLMAEGKILPYLDIPFQHASPRILKLMKRPGNIDKTLERIRNWRKVVPDLTIRST
FIVGFPGETDAEFEELLDFLREAELDRVGAFAYSPVDGAKANELPGAVSEELKEDRLEQF
MAVQAEISAAKLQRKIGRTLKVLVDEAGANGAVARSASDAPEIDGVVHIANGQLLKPGQF
VDVVVEDADEHDLHARLAG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggcctcgcccaaagtcggtttcgtcagcctcggttgtcccaaggccctggtc
gactccgaacgcatcctcacccagctgaaggtcgagggctacgagatcgtgcccagctac
ggcgctgccgatgccgtggtcgtcaacacctgcggcttcatcgatgcggccgtgcaggaa
tcgctggatgccatcggcgaggcgttgcacgagaacggcaaagtcatcgtcaccggctgt
ctgggcaagcgctcggagctgatccgtgaagcctacccggacgtgctcgcgatcaccgga
ccgcaggactacgccagcgtgatgaccgccgtgcattcggcgctgccgcccaagcgcaac
ccgctgctggacatcatcccggacaccggcatcaagctgacgccgaagcactacgcgtac
ctgaagatttccgaaggctgcaaccatcgctgcagcttctgcatcatcccgtcgatgcgt
ggcgacctcgtgtcgcgtccggtcgatgaagtgctggtggaagccgagcgcctggtgaag
ggtggcgtgaaggagctgctggtgatctcgcaggacaccagtgcctacggcgtcgacgtg
aagtacgccgagcgccagtggcgcgacaagagctaccgcacgcgcatgacggaactgtgc
gaaggcctttccgaactcggcgtatggacgcgactgcattacgtctacccgtatccgcac
gtggacgaggtgatgccgttgatggcggagggcaagatccttccttacctcgacatcccg
ttccagcacgccagcccgcgcatcctcaagctgatgaagcgcccgggcaacatcgacaag
acgctggagcgcatccgcaactggcgcaaggtcgtgcctgacctcaccatccgcagcacc
ttcatcgtcggcttccccggcgagacggatgcggagttcgaggagctgctcgatttcctg
cgcgaggcagaactcgatcgcgtcggcgcgttcgcctactcgccggtggacggcgccaag
gccaacgaactgccgggcgccgtatccgaggaattgaaggaagatcgcctcgagcagttc
atggcggtgcaggcggaaatctccgcggccaagctgcagcgcaagatcggccgcacgctg
aaggtgctggtcgatgaggctggcgccaacggtgccgtcgcgcgttccgcctccgatgca
ccggaaatcgacggtgtggtgcatatcgccaacggccagctgctgaagccgggccagttc
gtcgatgtcgtggtggaagacgccgacgagcacgacctgcacgcgcgtctggcgggctga
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