Dyella jiangningensis: CH75_14525
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Entry
CH75_14525 CDS
T03074
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dji
Dyella jiangningensis
Pathway
dji03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CH75_14525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dji03021
]
CH75_14525
03400 DNA repair and recombination proteins [BR:
dji03400
]
CH75_14525
Enzymes [BR:
dji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CH75_14525
Transcription machinery [BR:
dji03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CH75_14525
DNA repair and recombination proteins [BR:
dji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CH75_14525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
RnfC_N
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AHX14278
LinkDB
All DBs
Position
complement(3122562..3126776)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLLNLFNQQRTAPDFDAIKIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAA
IFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAFVVIDPGLTALERGQLLSEDQYLEAVEEHGDEFDARM
GAEAVYELLKSLDLPGEVVRLKEEIASTNSETKLKRLTKRVKLIEAFLESGNRPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREEGQVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEA
RALMMATNNILSPANGEPIIVPTQDVVLGLYYMTRELVNAKGNGMVFSGIGEVRRAYDNR
AVQLHAKVKVRINQVQIDEDGNRTETTQLVDTTVGRALLLEIMPEGLPFALANVELTKKN
ISRLINQCYRRLGLKETVIFGDQLMYTGFRFATRAGISIGIDDMIIPAEKKPILEEAEKE
VVEIQEQYQSGLVTAGERYNKVVDIWSRTNELVAKAMIDGIGTEKVTDAEGKTVNQKSMN
SLYIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITLPDCGTDEGVTMQPIVEGGDVVEPLRDRVL
GRVALEDVYGPGEDNEPIVTRDTLLDEALVEKLDKAGVQSIKVRSPITCAADHGVCALCY
GRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGTLK
FNNLKTVQHSQGHLVAVSRSGEVSVIDANGRERERYKVPYGATIAVKDGDPVKAGQAVAN
WDPHTHPIVSEVAGTVRFIDFIDGVTVQSQTDELTGLESAVVTDPKRRGTAAKDLRPIVR
LEDAKGRELKLPGTDVPAQYMLPAGAIVSIQNGVQVGVGDVVARIPQETSKTRDITGGLP
RVADLFEARKPKEPAILAERSGVVSFGKDTKGKQRLIIKDVDGNEHEELIPKWRQVIVFE
GEHVEKGETIVDGEPSPHDILRLLGVEPLASYLVKEIQDVYRLQGVKINDKHIEAIIRQM
LRKVEITEPGDSHYLRGEQVERVRINAENERAVKRGERPAEFQSVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHASRHRQGGLTASEL
ETLSGSASSASFSEATTGSDIGVE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttgctcaatctgttcaaccagcagcgcaccgcgcctgacttcgatgcgatc
aagatcgctctggcttcgccggagctgatccgctcgtggtcgtacggcgaggtgaagaag
ccggagacgatcaactaccgcaccttcaagcccgagcgtgacggcctgttctgcgccgcc
atcttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtgtgcgaaaagtgtggcacggaagtgacgctggccaaggtgcgccgtgag
cgcatgggccacatcgaactggcctcgccgaccgcgcacatctggttcctcaagtcgctg
ccctcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcatcctgtac
ttcgaagcgttcgtcgtgatcgatccgggtctgaccgcgctcgagcgcggccagctcctc
agcgaagaccagtacctggaagccgtggaagagcacggtgacgagttcgacgcccgcatg
ggtgccgaggccgtctacgagctgctcaagtccctggatcttccgggcgaagtcgtgcgc
ctgaaggaagagatcgcctccaccaactccgagaccaagctcaagcgcctcaccaagcgc
gtgaagctgatcgaggcgttcctggagtcgggcaaccgtccggaatggatggtgctgacc
gtactgccggtgctgccgccggacctgcgtccgctggtgccgctggatggtggccgcttc
gccacgtccgacctgaatgacctgtaccgtcgcgtcatcaaccgcaacaaccgcctgcgt
cgcctgctcgaactcaatgcgcccgacatcatcgtgcgcaacgagaagcgcatgctgcag
gaatcggtcgacgcgctgctcgacaacggccgtcgcggccgtgccatcaccggcacgaac
aagcgcgcgctgaagtcgctcgccgacatgatcaagggcaagcagggccgcttccgccag
aacctgctcggcaagcgcgtggactactccggtcgttcggtgatcgtggtgggcccgacc
ctgcgtctgcaccagtgcggtctgccgaagaagatggcgctcgagctgttcaagcccttc
atcttcgccaagctgcaggctcgcggcgaagcgaccaccatcaaggctgccaagaagctc
gtcgagcgcgaagaaggccaggtgtgggacatcctcgaagaggtgatccgcgagcatccc
gtgatgctcaaccgcgcaccgaccctgcatcgtctcggcatccaggcgttcgagccgaag
ctgatcgaaggcaaggccatccagctgcacccgctcgtgtgtacggcattcaacgccgac
ttcgacggtgaccagatggcggtgcacgtgccgctctcgatcgaggcgcagctcgaagcg
cgcgccctgatgatggcgaccaacaacatcctgtcgcccgccaacggcgagccgatcatc
gtgccgacccaggacgtggtgctgggcctgtactacatgacccgcgagctggtgaacgcg
aagggcaatggcatggtgttctcgggcatcggcgaagttcgccgtgcctacgacaaccgc
gccgtgcagctgcatgccaaggtcaaggtccgcatcaaccaggtgcagatcgacgaagac
ggcaaccgcaccgaaaccacccagctggtcgacacgaccgtgggtcgcgcgctgctgctc
gaaatcatgccggaaggcctgccgttcgcgctggccaacgtcgagctgaccaagaagaac
atctcgcgcctgatcaaccagtgctaccgccgcctgggcctgaaggaaaccgtgatcttc
ggcgaccagctgatgtacaccggtttccgcttcgccacgcgtgcgggtatctccatcggc
atcgatgacatgatcatcccggccgagaagaagccgatcctggaagaagccgagaaggag
gtcgtcgagatccaggagcagtaccagtcgggtctcgtgaccgccggcgagcgctacaac
aaggtcgtcgacatctggtcgcgcaccaacgaactcgtcgccaaggcgatgatcgacggt
atcggtaccgagaaggtgaccgatgccgaaggcaagacggtcaaccagaagtccatgaac
tcgctgtacatcatggccgactccggcgctcgtggttcggtcgcccagattcgtcagctg
gccggtatgcgcggcctgatggctcgtccggacggctcgatcatcgagacgcccattaag
gcaaacttccgcgaaggcctgaacgttctgcagtacttcaactccacccacggtgcccgt
aagggtctcgcggatacggcgctgaagaccgcgaactccggttacctcacccgtcgtctc
gtcgatgtggcgcaggacgtggtcattaccttgcccgattgcggcacggatgaaggcgtc
accatgcagccgatcgtggaaggcggcgacgtggtcgagccgttgcgcgatcgcgtgctg
ggtcgtgtggcgctggaagacgtctacggcccgggtgaagacaacgagccgatcgtcaca
cgcgatacgttgctggacgaagccctggtcgagaagctcgacaaggccggcgtgcagtcg
atcaaggtgcgttcgcccatcacctgtgccgccgaccatggcgtgtgtgcgctgtgctac
ggccgcgacctggcccgtggtcacctggtgaacatgggtgaagccgtgggtgtggtggct
gcgcagtcgatcggtgagccgggtacccagctgaccatgcgtacgttccacatcggtggt
gcggcgtctcgtgcggctgccgtggacaacgtgacggtgaagaccaccggcacgctgaag
ttcaacaacctcaagaccgtgcagcactcgcagggtcacctagtggcggtgtcgcgttcg
ggcgaagtgagcgtcatcgacgccaacggccgcgagcgtgagcgttacaaggtgccttac
ggcgccaccatcgcggtcaaggacggcgacccggtcaaggccggccaggccgtggccaac
tgggatccgcatacccatccgatcgtctcggaagtggccggtaccgtgcgcttcatcgac
ttcatcgatggcgtcaccgtgcagagccagaccgacgaactgaccggcctggagtcggcg
gtggtgaccgatccgaagcgccgtggtacggccgccaaggatctgcgcccgatcgtgcgt
ctggaagacgccaagggtcgcgagctgaagctgccgggcaccgacgtgccggcgcagtac
atgctcccggccggcgccatcgtgtcgatccagaacggcgtgcaggtgggtgtgggtgac
gtggtcgcccgtatcccgcaggaaacgtcgaagacccgcgacatcaccggtggtctgccg
cgcgtggccgacttgttcgaagcccgcaagccgaaggaaccggcgattctcgccgagcgt
tcgggtgtggtcagcttcggcaaggacaccaagggcaagcagcgcctcatcatcaaggac
gtggatggcaacgagcacgaggagctgattcccaagtggcgtcaggtcatcgtgttcgaa
ggcgagcacgtggagaagggcgaaaccatcgtggacggcgagcccagtccgcacgacatc
ctgcgcctgctgggtgtcgagccgctggcttcgtacctggtcaaggaaatccaggacgtc
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaagcgatcattcgccagatg
ctgcgcaaggtcgagatcaccgagccgggcgacagccactatctgcgcggtgagcaggtc
gagcgtgtccgcatcaacgcggagaacgagcgtgccgtgaagcgtggcgagcgaccggcg
gaattccagtcggtgctgctgggcatcaccaaggcctcgctggccacggaatccttcatc
tcggcggcttccttccaggaaaccacccgagtgctgacggaagccgcggtccgtgggacg
cgcgacaccttgcgtggcctgaaggaaaatgttattgtcggccgtctcattccggcgggt
acgggtctggcgtatcacgcatcgcgtcatcgccaaggcggtctgaccgcctcggagctt
gaaactctctccggctccgcttcgtcggcttccttctcggaagccaccaccggtagcgac
attggtgtggagtaa
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integrated database retrieval system
