Dyella jiangningensis: CH75_15455
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Entry
CH75_15455 CDS
T03074
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dji
Dyella jiangningensis
Pathway
dji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH75_15455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dji03019
]
CH75_15455
03400 DNA repair and recombination proteins [BR:
dji03400
]
CH75_15455
Enzymes [BR:
dji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH75_15455
Messenger RNA biogenesis [BR:
dji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CH75_15455
DNA repair and recombination proteins [BR:
dji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CH75_15455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AHX14437
LinkDB
All DBs
Position
complement(3304066..3305880)
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AA seq
604 aa
AA seq
DB search
MPSSPLDILHSVFGYTQFRGQQQFIVEHLIEGGDALVLMPTGGGKSLCYQIPALVRQGIG
IVVSPLIALMQDQVDALREAGVAAAYLNSSLGAEDQREVERRLLAGELNLLYVAPERLLT
PRFLSLLERTEVALFAIDEAHCVSQWGHDFRPEYRELVVLHQRFPDVPRIALTATADERT
RDEIVERLALQQARQFVSSFDRPNIRYHVGQRHNARRQLMEFLERRRGETGIVYALSRRK
VDETAAWLAEAGIDALPYHAGLDAATRHAHQRRFLREDGLVMVATVAFGMGIDKPDVRFV
AHLDLPRSMEGYYQETGRAGRDSLPADAWMIYGLSDVVTMSQMIAQSESADDRKRVERQK
LELLLAYAEATECRRELLLAAFGETFHGPCGRCDNCIEPPKTWDATVPAQKALSAVYRSG
QRFGSGHVISILRGEDSSRMSELGHDRLSTFGIGADMDDKQWRSVFRQLLAMGLLEADAE
GFGTLRLTKASREVLVGNRTVRLREDARPVRASRRRRDSQLVTGGSLGVEAYEQPLWDEL
RKLRTQLAKQHGVPPYVIFHDATLLAMLRALPSNEAELGAISGVGEAKLKRYGKDFLSVI
NAHE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctcgcccctcgatattctccatagcgtttttggttacacccagtttcgcggc
cagcagcagttcatcgtcgagcacctgatcgaaggtggcgatgcgctggtgctcatgcct
accggcggcggcaagtcgctgtgctatcagattcccgccctcgtgcggcaaggcatcggc
attgtggtgtccccgctgatcgcgttgatgcaggaccaggtggatgcgctgcgcgaagcc
ggcgtggcagcggcctatctcaactccagcctcggcgcggaagaccagcgcgaagtcgag
cgacgcctgctggcgggtgaattgaacctgctttatgtggcgccggaacggttgctgacg
ccccgcttcctcagcctgctcgagcgcactgaagtggcgctgttcgccatcgacgaagcg
cattgcgtatcgcagtggggtcacgatttccggcccgaataccgcgagctggtggtgctg
caccagcggtttcccgacgtgccgcgcattgcgctcacggccacggcggacgagcgtacc
cgcgacgaaatcgtcgagcgactggccttgcagcaggcgcgccagttcgtctccagtttc
gatcgcccgaacatccgctaccacgttggccagcgccacaacgcgcgccgtcagttgatg
gaatttctcgagcggcgccgcggggaaaccggcatcgtgtacgcgctcagtcgccgcaag
gtggacgagacggcggcgtggctggccgaagcaggcatcgatgcattgccctatcacgcc
ggcctcgatgcagcgacccgtcacgcgcatcagcgccgcttcctccgcgaggacggcctg
gtgatggtggctaccgtggccttcggcatgggcatcgacaagcccgatgtccgctttgtc
gcgcatctggacctgccgcgcagcatggaaggctattaccaggagacggggcgtgcaggc
cgcgacagtctccccgccgatgcctggatgatctatggcctgtcggacgtggtgacgatg
agccagatgattgcgcagtccgagtcggccgacgatcgcaagcgcgtcgagcggcagaag
ctggaattgctgctcgcttacgccgaggcaacggagtgccgtcgagagttgttgctggcg
gcgtttggcgaaactttccacggcccctgcgggcgctgcgacaactgcatcgagccgccg
aagacctgggacgccacggtgcccgcacagaaggcgctatcagcggtgtatcgcagcggg
cagcggttcgggtccggccacgtgatcagcatcctgcgcggtgaagacagttcgcgcatg
agcgaactgggccacgatcgcctttccacgttcggcatcggcgcggacatggacgacaag
cagtggcgctccgtgttccgccagctgctggcgatggggctgctcgaagccgacgcggaa
ggcttcggcacgctgcgactcaccaaggccagccgcgaggtgctggtgggcaaccgcacc
gtgcggttgcgtgaagatgcgcgacccgtacgggcctcgcgcaggcgccgtgacagccag
ctggtgacaggtggaagcctgggcgtggaagcctacgagcagccgctatgggatgaattg
cgcaagctgcgcacccagctggccaagcagcatggcgtgccgccctacgtgatcttccac
gatgccacgctcttggcgatgctgcgcgccctgccttccaacgaagccgaactgggcgcg
atcagcggcgtgggcgaggcgaagctcaagcgttacggcaaggattttctctcggtcatc
aacgcacacgagtaa
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