Dyella jiangningensis: CH75_22210
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Entry
CH75_22210 CDS
T03074
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dji
Dyella jiangningensis
Pathway
dji03420
Nucleotide excision repair
dji03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH75_22210 (uvrD)
03430 Mismatch repair
CH75_22210 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dji03400
]
CH75_22210 (uvrD)
Enzymes [BR:
dji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH75_22210 (uvrD)
DNA repair and recombination proteins [BR:
dji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH75_22210 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CH75_22210 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AHX15642
LinkDB
All DBs
Position
complement(4855416..4857611)
Genome browser
AA seq
731 aa
AA seq
DB search
MDVSHLIDKLNDAQREAVCAPPGNYLVLAGAGSGKTRVLTHRIGWLTQVEHISPWAILAV
TFTNKAAGEMRARLDQLIPGGTQGLTVGTFHGIAHRLLRRHWREAGLPEGFQILDADDQQ
RIVKRVVTGLGLDEARFPPRQATWQINQWKDEGKRADTIEHRDHPMTRTLVQIYQAYEEA
CRRAGLVDFAELLLRAHELWLNNPQILDHYRDRWRYLLIDEFQDTNTLQYAWIRVLAGNT
GQVFVVGDDDQAIYGWRGAKVENVQQFLRDFPGAKTIKLEQNYRSTATILKAANSVIARN
GGRLGKQLWTDGGDGERIALYASYNEQDEARFVVERIREYVAEHGEARDIAILYRSNAQS
RNFEEQLMQRDIRFRVYGGQRFFDRAEIKDALAYLRLSSNRHDDAAFERAVNTPPRGIGD
RTLDVLRRRAREERSSMWESALSELSGGRELAGRAKNAVKAFLSMIEDMARAFAGTETGN
ALALAEQIDHAITHSGLRDFYEKDSRGNAESRVENLDELVNVASRFELTPDDVEAGLSEL
AAFLSHAALEAGEGQGESWDDCVQLMTLHSAKGLEFPVVFLVGMEEGLFPSQRSVEDEGR
LEEERRLAYVGITRARERLFITYAESRRMHGVEMLARPSRFLAEIPPELIDEVRPRVQVS
RPLYGARPTGGSISLDEPMPLKLGQRVSHPSFGEGVVVSAEGSGAHMRIQVNFASAGSKW
LVYAYANLTPM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgatcgacaagctcaacgatgcgcagcgcgaagcggtctgcgcc
ccacccggcaactacctcgtgctcgctggcgccggctccggcaagacccgcgtgctcacg
caccgcatcggctggctcacgcaggtggaacacatctcgccgtgggcgatcctcgcggtg
accttcaccaacaaggccgcgggcgagatgcgcgcgcgtctggaccagttgattccgggt
ggaacgcagggtcttaccgtgggcaccttccacggcatcgcccatcgcctgctgcgtcgc
cattggcgcgaagcggggctgccggaaggtttccagattctcgatgcagacgaccagcag
cgcatcgtcaagcgcgtggtcaccgggctgggcctggacgaagcgcgttttccgccgcgc
caggccacgtggcagatcaaccagtggaaggacgagggcaagcgcgccgacaccatcgag
caccgcgatcatccgatgacgcgcacgctcgtgcagatctaccaggcctatgaagaggcc
tgccgtcgcgcgggtctggtggatttcgccgagctgctgttgcgcgcgcacgagctgtgg
ttgaacaacccgcagatcctcgatcattaccgtgatcgctggcgctacctgctgatcgac
gagttccaggacaccaacaccttgcaatacgcgtggatccgcgtgctcgccggcaacacc
ggccaggtgttcgtggtgggcgacgacgaccaggccatctatggctggcgcggcgccaag
gtggagaacgtgcagcagttcctgcgcgatttccccggcgccaagaccatcaagctggaa
cagaactaccgctccaccgcgactatcctcaaggccgccaacagcgtgatcgcgcgcaac
ggcggccgccttggcaagcagctgtggactgacggcggcgacggcgagcgcatcgcgctg
tatgcctcgtacaacgagcaggacgaagcacgcttcgtggtggagcgcatccgcgagtac
gtcgccgaacacggcgaggcgcgcgacatcgcgatcctctatcggtccaatgcgcagtcg
cgcaacttcgaagaacagctgatgcagcgggacatccgcttccgcgtgtacggcggccag
cgcttcttcgatcgcgccgaaatcaaggacgcgctcgcctacctgcgcctgtcttccaat
cgccacgatgacgcggcgttcgagcgggcggtgaacacgccgccgcggggcatcggcgat
cgcacgctggacgtgttgcgacgtcgcgcgcgcgaagaacgcagctcgatgtgggagtcc
gcgctcagcgagttgagcggcggcagggaactggccggtcgcgcgaagaacgcggtaaag
gccttcctctcgatgatcgaggacatggcgcgcgcgttcgccggcactgagacgggcaac
gcactcgcgctggccgaacagatcgaccacgccatcacccacagcggactgcgcgacttc
tacgagaaagacagtcgcggcaacgccgaatcccgcgtggagaacctggacgaactggtc
aatgtcgccagccgcttcgagctcacgcccgatgatgtcgaagcgggcctgagcgaactt
gccgcattcctctcgcatgccgcgctcgaagcgggcgagggccagggcgaatcctgggac
gactgcgtgcagttgatgacgctgcattcggctaagggcctggaatttcccgtggtgttc
ctggtcggcatggaggaaggcttgttccccagccagcgctcggtggaagacgaaggccgt
ctagaagaggagcgccgcctcgcctacgtgggcatcacgcgcgcacgcgaacggctgttc
atcacgtacgccgaatcgcgtcgcatgcatggcgtggaaatgctggcgcggccgtcgcgc
tttctagcggagatcccgccggaactcatcgacgaagtgcgcccgcgtgtgcaagtgagc
cgcccgctgtatggcgcgcgtccgaccggcggttcgatctcgctggacgaacccatgccg
ctcaagctggggcaacgcgtcagccacccgagcttcggtgaaggagtggtggtgagtgcc
gagggcagcggtgcgcatatgcgcatccaggtgaacttcgcctcggcgggcagcaagtgg
ctggtctatgcctatgccaacctgacgcccatgtga
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