Dermabacter jinjuensis: COP05_00285
Help
Entry
COP05_00285 CDS
T06191
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
djj
Dermabacter jinjuensis
Pathway
djj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
COP05_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RibLong
Rib
He_PIG
ChapFlgA_N
Big_6
aRib
Ig_VWA7
DUF7604
TSP3_bac
Big_15
Big_9
MG2
FlgD_ig
Gram_pos_anchor
TSP_3
Motif
Other DBs
NCBI-ProteinID:
ATH95706
LinkDB
All DBs
Position
complement(62033..66811)
Genome browser
AA seq
1592 aa
AA seq
DB search
MVNGKSHGAFYRKPVRIGSAALTLALVTSMAPSFTASGLDRAMAAQPAQTAPAALPMEPA
ADQNQVIDADMIASGRVTKAGNLTDAHGVGKGLISGHVYLTSPNGNPGAAYDNGNVKLDG
ITVYAQFRDKDGSYSPIFSAKTHTLPNVVAGNGGQGTFAFGTGDKGMTWTDKHGVEHTYS
ARTDQQHRIWVEPFTNDRGNRVEMFRQANGWTPGSFVYPAEGPMGSFVASDGNMQLMAAF
LREIPPSHENSYMAAKGDKLVEDPEGPIGGAAVQTDVPNTISGEVWLETGGSPDWGFPAT
GPKREPKDPAADGYTVYASTLTKDGAAANKALHAKFKDDPSKLAEETKKMLEEHPEYILK
TVYGKTNNKGEYTLRFGKYEKGQVREDVLNPNHVFMWVENKDGVVQTGYTGFHTPIFQRF
DGGGNFKPNPVPAENQTLINFNGLPFQNLNSLYNVHHALMPYTPVSIKADYNATDKPAAP
GTKVTPEFKGELSDLPSKIEWRDKSGKVVKTCELDQSKNAKDQVAACTFDIPAGAQKGDV
YNVVVVSGGNDVAAWSVLVTDKNSDSFEPKYEGKLVVPGKETKSSPSFTDKDGKDVKAPE
GSKFKITDGFTAPEGYEVKIDENTGEITVTFPDGSKLNKDTVEEFDVPVTVTYPDKTTDE
VKANFKLDTDGDGKPDTTDEDDDNDGIPDEDDSNPKVPNANDHFEPGYEDGSGKPGEDVT
VPAPGFKDKDGKDTKAPEGTKFAPGENVPGGVTIDENTGEITVSIPEGAKPGDKITVPVV
VTYPDGTKDTVDVTVTVTDKDAGLYEPAYEGKLVVPGEETKSSPSFTDKDGKDVKAPEGS
KFKITDGFTAPEGYEVKIDENTGEITVTFPDGSKLNKDTVEEFDVPVTVTYPDGSKDDAK
ANFKLDTDGDGKPDTEDGDDDNDGIPDKEEKDKGSNPKDKGSIPATPIEPGNPTNAATFE
PGYEDGSGKPGSDVKIDAPTFKDKDGKDTKAPEGTKFAPGENVPDGVTIDENTGEITVSI
PEGAKPGDKITVPVVVTYPDGTKDTVDVTVTVEQPDAPAPKQADELEPKYNDGAGQPGTT
APVDAPTFTNKDGDTVTVPEGTKFTTGKDGVEVAEDGSLKVQIPADAKPGNKITVPVTVT
YPDGSTDKVDVTVTVTNPDAKPEWGNGEGEPGAKVTVPNTGGDVPEGSTTEVEGPGKVEI
GENGELIVTIDENAKPGDKIVIVVKDPEGNKIGESTVTVTEPSKPDTKQNENFEPGYEDG
SGKPGDDVKVPAPEFKDKDGNPTDAPDGTKFTPGDKAPDGVKVDENTGEITVPIPEDAKP
GDKITVPVEVTYPDGSKDNVDVTVTVEKPVEKPDWNDDKGKPGDKVEIPNTGGPVEDGTT
VETEGPGKAEIGEDGKITVDIDKDAKPGDKVVVIVKDKDGNEIDRVVVEVEKPADKPAEK
PDWNDNSGKPGDNVVIPNEGGTVPDGSTVEVEGPGKAEIDKDGNIRVDIDKNAKPGDKVV
VIVKDKDGKVIDTVTVTVEKPEAPAEQPAPEGNDNGTANPKPGASNGNGPVKKVPLPRTG
AEVAGVAGAAAALIAAGLGLVFSRRRRTGEEN
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggttaatggaaagtcgcacggtgcattttatcgcaagcccgtgcgtattggatcagct
gccttgactctggctctggtcactagcatggcgccgagcttcaccgcgagcggcctggac
cgagccatggctgcacagccggcccagaccgcaccagccgccctgccgatggaaccggct
gccgatcagaatcaggtcatcgacgccgacatgatcgccagcggtcgtgtcacgaaggcc
ggcaacctgaccgacgctcacggcgttggtaagggtctgatctctggccacgtgtacctg
accagcccgaacggcaacccgggtgccgcctacgacaacggaaacgtcaagctggacggc
attaccgtctacgctcagttccgcgataaggacggctcctactcgccgatcttcagcgcg
aaaacccacaccctgccgaacgtcgttgccggtaacggtggccagggcaccttcgctttc
ggtacgggtgacaagggtatgacctggaccgacaagcatggtgtcgagcacacctattcg
gcacgtaccgaccagcagcaccgcatctgggtcgagccgttcacgaacgatcgtggcaac
cgtgttgagatgttccgtcaggccaacggttggacccccggttcattcgtttatcctgct
gaaggcccgatgggctcctttgtcgcatctgacggcaacatgcagctgatggctgcgttc
ctgcgtgagattccgccgagccacgagaacagctacatggcagccaagggcgacaagctc
gttgaagaccccgagggtccgatcggcggagcggctgttcagactgacgttccaaacacc
atctccggtgaagtatggctcgaaaccggtggcagcccggactggggcttcccggcaacc
ggcccgaagcgtgagcccaaagaccctgccgctgatggctacaccgtgtacgcgtcgacc
ctcaccaaggatggtgccgcggcgaacaaagctttgcacgcgaagttcaaggacgatccg
agcaagctcgccgaagaaaccaagaagatgcttgaggagcaccccgagtacatcctcaag
acggtgtacggtaagaccaacaacaagggtgaatacaccctgcgctttggaaagtacgaa
aagggccaggttcgtgaagatgttctcaacccgaaccacgtctttatgtgggttgagaac
aaggacggcgtagtccagaccggctacaccggcttccacaccccaatcttccagcgtttc
gacggcggcggtaacttcaagccaaacccggttccggctgaaaaccagacgctgattaac
ttcaacggccttcccttccagaacctcaattcgctgtacaacgtccaccacgccctgatg
ccgtacactccggtgtcgatcaaggctgactacaacgcaaccgacaagcctgcagctccg
ggcactaaggtgacccctgagttcaagggtgagctgtctgatctgccgtcgaagattgaa
tggcgcgataagagcggcaaggtcgtcaagacctgcgagctcgaccagtccaagaacgct
aaggatcaggtcgcggcgtgcacgttcgatattccggccggcgcccagaagggtgacgtt
tacaacgtcgttgtggtctcgggcggaaacgatgtcgccgcatggtctgttctcgtgacc
gacaagaactccgacagctttgagccgaagtatgagggcaagttggttgttcctggcaag
gagaccaagtcgtccccgtcgttcactgataaggacggtaaggacgtcaaggctcctgag
ggttcgaagttcaagatcactgacggcttcactgctcctgagggctatgaggtcaagatt
gatgagaacaccggtgagatcacggtgacgttcccggacgggtcgaagctgaacaaggac
accgttgaggagttcgatgttccggtgacggtgacgtacccggataagaccaccgatgag
gtgaaggcgaacttcaagctggataccgatggtgacggtaagcctgacaccaccgatgag
gatgacgataacgacggcatcccggacgaagatgacagcaacccgaaggttccgaacgcg
aacgatcacttcgagcctggctacgaagatggttcgggtaagcctggtgaggacgtcacg
gttcctgctcctggtttcaaggacaaggacggtaaggacactaaggctcctgagggcacg
aagttcgctcctggtgagaacgtgcctggtggtgtgaccatcgatgagaacactggtgag
atcaccgttagcatccctgagggtgctaagcctggtgacaagatcactgttcctgttgtt
gtgacttacccggatggcacgaaggacaccgttgacgtcaccgtcacggtgactgataag
gatgccggcctgtacgagcctgcgtatgagggcaagttggttgttcctggtgaggagacc
aagtcgtccccgtcgttcactgataaggacggtaaggacgtcaaggctcctgagggttcg
aagttcaagatcactgacggcttcactgctcctgagggctatgaggtcaagattgatgag
aacaccggtgagatcacggtgacgttcccggacgggtcgaagctgaacaaggacaccgtt
gaggagttcgatgttccggtgacggtgacctaccctgacggcagcaaggatgacgctaag
gcgaacttcaagctggataccgatggtgacggtaagcctgacaccgaggacggcgatgac
gataacgacggcatcccggataaggaagagaaggacaagggttcaaacccgaaggataag
ggctcgattccggcaactccgatcgagccgggtaaccccaccaatgccgcaaccttcgag
cctggttacgaggatggttcgggtaagccgggtagcgatgtgaagatcgatgctccgacg
ttcaaggacaaggacggtaaggacactaaggctcctgagggcacgaagttcgctcctggt
gagaacgtgcctgatggtgtgaccatcgatgagaacactggtgagatcaccgttagcatc
cctgagggtgctaagcctggtgacaagatcactgttcctgttgttgtgacttacccggat
ggcacgaaggacactgttgacgtcaccgtcacggttgagcagcctgatgctcctgcgccc
aagcaggctgacgagctcgaaccgaagtacaacgatggtgctggccagcctggtaccacc
gctccggttgacgctccgaccttcaccaacaaggacggcgacactgtcacggttccggaa
ggcacgaagttcaccaccggcaaggacggtgtggaagttgctgaagatggatcgctgaag
gtccagattccggctgacgccaagcctggtaacaagatcacggttccggtgaccgtgacc
tacccggatggaagcaccgacaaggttgatgtgactgttactgtcactaaccctgacgcg
aagcccgaatggggcaacggtgaaggtgaacctggtgccaaggtgactgtcccgaacacc
ggtggcgacgttccggaaggctccacgaccgaggtcgaaggccccggcaaggttgaaatc
ggcgaaaacggcgaactcatcgtcacgatcgatgaaaacgccaagcccggcgacaagatc
gtcatcgtcgtgaaggacccggaaggcaacaagatcggtgaatcgaccgtgactgttacc
gaaccgtccaagcccgacactaagcagaacgaaaacttcgagcctggctacgaagatggt
tcgggtaagcctggtgacgacgtgaaggttcccgctcctgagttcaaggacaaggacggt
aacccgactgacgctcctgatggcactaagttcacccctggtgacaaggcgcctgatggt
gtgaaggttgacgagaacaccggtgagatcacggttccgatccctgaggatgcgaagccc
ggtgacaagatcaccgttccggttgaggtgacttacccggatggttcgaaggacaacgtt
gacgtcacggtgactgttgagaagccggtcgaaaagccggactggaatgacgacaagggt
aagcctggcgacaaggtcgagattccgaacaccggtggccccgttgaagacggcaccacc
gttgagacggaaggccctggtaaggctgagatcggtgaagacggcaagatcactgtcgac
atcgacaaggatgccaagcccggtgacaaggttgttgtcattgtcaaggacaaggacggc
aacgagatcgaccgtgtagtcgtcgaggttgagaagcctgcagacaagccggccgaaaag
cctgactggaatgacaacagcggtaagcctggcgacaacgttgtgatcccgaacgagggt
ggcacggttccggacggctcgactgttgaggtcgaaggccccggtaaggctgaaatcgac
aaggatggcaacatccgtgttgatatcgacaagaacgccaagcccggtgacaaggttgtt
gtcattgtcaaggacaaggacggcaaggtaatcgatacggtcacggtgactgttgagaag
cctgaggctcctgcggaacagcccgcgcccgaaggcaacgacaacggcactgctaacccg
aagcccggcgcttcgaatggcaacggccctgtgaagaaggtgccgctgcccaggaccggt
gctgaggttgcaggtgtggctggtgctgcggctgcactcatcgcagcaggccttggcctc
gtgttctcgcgccgccgccggacaggcgaggagaactga
DBGET
integrated database retrieval system
