Dermabacter jinjuensis: COP05_00440
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Entry
COP05_00440 CDS
T06191
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COP05_00440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
djj03019
]
COP05_00440
Enzymes [BR:
djj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
COP05_00440
Messenger RNA biogenesis [BR:
djj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
COP05_00440
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ATH97521
LinkDB
All DBs
Position
110556..112001
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AA seq
481 aa
AA seq
DB search
MFQALPASVHELGQMFESAGEELALVGGPVRDALLGRSSDDLDFTTSARPDETERILRTW
VGKRGAIWDMGREFGTLGAQLDGVKVEITTYRTEEYDPQSRKPQVAYGDTIDGDLSRRDF
TVNAMAVRLPSLEFIDPFGGLEDLAAGLLRTPVAPEQSFSDDPLRMMRAVRFASTLGFDI
EEGTARAIAALAGRLEIVSAERVREELVKLMLGDHPRRALEQMVDFGLAEIILPELPAMR
LEIDEHHRHKDVYTHSLTVLEQAIDLETGPEGPVPGPDFILRFAALMHDCAKPNTRRYEE
GGVVTFRFHEVVGARMAKARMKALKFDKETTKAVAHLIELHLRFHGYADSEWTDSAVRRY
VTDAGDQLERLHRLTRADCTTRNKRKAQRLREAYDDLEKRIAELAEQEEISKIRPDLDGR
AIMQILDLKPGPAVGKAYAYLLELRMEEGPLGEEEASRRLQEWWAHNGAHESAPATRGTS
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggcgcttccagcctccgttcacgagctcggtcaaatgttcgagagtgcaggc
gaggaactggcactcgtgggcgggcccgtgcgcgacgcgcttcttggacgtagcagcgat
gacctcgacttcacgacgtcggcgaggcctgacgagaccgagcgcatccttcgcacatgg
gtaggtaagcgcggcgcgatatgggacatggggcgcgagtttggcacgctcggcgcgcag
ctcgacggcgtcaaggtcgagatcacgacgtaccgcacggaggaatacgatccgcagtct
cgaaagccgcaggtcgcgtacggtgacacgatcgatggtgatctctcgcgacgcgacttc
accgtgaacgcgatggccgttcgtcttccctccctcgagttcatcgatccgttcggcggc
ctcgaagatcttgccgcggggcttcttcgtacaccggtcgcccccgaacagtccttcagc
gacgacccgcttcggatgatgcgcgccgtacgtttcgcctcgacccttggattcgacatc
gaggagggaaccgcgcgcgcgatcgccgccctcgccggccgcctcgagatcgtgagcgcc
gagcgtgtgcgcgaagaactcgtcaagctcatgctcggcgatcacccaaggcgtgccctc
gagcagatggtcgattttggcctcgccgagatcatccttcccgagcttcccgcgatgcgg
ctcgagatcgacgagcaccacagacacaaggatgtctacacgcattcgctcacggtgctt
gagcaggcgattgaccttgaaacaggccccgaaggaccggttcccggccccgacttcatt
ttgcgattcgcggcgctcatgcacgattgcgcgaagcccaatacgcgccgctacgaagaa
ggcggagtcgtgaccttccggttccacgaagtcgtgggggcgcgcatggcgaaggcccga
atgaaggcactcaagttcgataaggagacgaccaaggcggtcgcacacctcatcgaactg
catcttcgctttcacggctacgcggatagcgaatggacagactcggccgtgcgccgctac
gtgacggacgcgggcgatcagctggagcgcctccaccgcctcacgcgtgccgattgcacg
acccgcaataaacgcaaggcccagcgccttcgcgaagcctacgatgacctcgaaaaacgc
atcgccgagctcgcggaacaagaagagatctccaaaatccggcccgatctggatggccgc
gcgatcatgcagattcttgacctcaagcccggcccggcagtcggcaaggcatatgcctac
cttcttgagctgcgcatggaggagggacctctcggcgaggaggaagcctcgaggcgcctt
caggaatggtgggcgcataatggggcgcacgaaagcgcgccggcgacgagaggaacctcg
aagtga
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