Dermabacter jinjuensis: COP05_01020
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Entry
COP05_01020 CDS
T06191
Name
(GenBank) hypothetical protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj00511
Other glycan degradation
djj00600
Sphingolipid metabolism
djj01100
Metabolic pathways
djj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
COP05_01020
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
COP05_01020
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
COP05_01020
Enzymes [BR:
djj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
COP05_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
NPCBM_assoc
Reelin_subrepeat-B
Sortilin-Vps10
Fn3-like
HYDIN_VesB_CFA65-like_Ig
CARDB
WxLIP_PGBD
DUF2264_C
Motif
Other DBs
NCBI-ProteinID:
ATH95829
LinkDB
All DBs
Position
complement(248500..250071)
Genome browser
AA seq
523 aa
AA seq
DB search
MMNSPLSLRARGLAFGATVALALGVPMSALAAPSDSPGAADAPASESSFTSQRIAMGGEG
GFGNYRIPAVIQLKNGDVLAAYDGRPTGTDAPGPNSILMRRSTDGGKTFGPQTVIAAGKV
EKPIHGYSDPSFVYDEETGNLFTFFVHSKDTGFWNSHEGNDDADRKVMSASVAVSKDNGE
TWELRSLTETVKPEGVRATFATSGHGIQIKNGTHKGRLVQQYAGAFTDGTVRAYSVYSDD
HGATWHMGTPVGTKMDENKVVELADGTLMMNSRAHDTYTARWVAYSKDGGETWSEPSLDH
TLTDPRNNASIIRMNPAAAPESRAAQELLFSNANSSSGRTNGSIRYSCDSGKTWPTVTTF
NAGDTSYSDLVALEDGSFGVFYESAKNEQRYGAFTREFLNPFCAAFGEAAADIGAGNTSE
VTFTLRNDDTRDLASGTATVDLPKGWSAPTVETPALKPGESTTVTLKVSAPAWAPKGEVH
GDVRVAAADITVRGDLDLNVINTAPDTLGARSWERLASLNATS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcccccctttcccttcgagcgagagggctcgcctttggcgcaacggtggca
cttgcgctcggcgtaccaatgtcggcgctcgcggcgccttctgactcgccaggagcggcc
gacgctcccgcgtccgaatcgagtttcacatcgcaacgcatcgctatgggcggtgaaggt
gggttcggcaactaccgcatccctgccgtcatccagctcaagaacggcgatgtccttgct
gcttacgacggccgaccgacgggcaccgatgcacccggaccaaattcgatcctcatgagg
cgttcgaccgatggtggaaaaactttcgggccccaaaccgtgatcgccgcaggcaaggtt
gagaagccgatccacggctactcggaccctagcttcgtgtacgacgaggaaacgggaaat
cttttcacgttcttcgtgcactcgaaggacacgggtttttggaatagccacgagggcaat
gatgatgctgatcgcaaggtcatgagtgcttcggtggccgtgtcgaaggacaatggcgag
acgtgggagcttcgctccctcaccgaaacggtcaagcctgagggcgtgcgcgcgacgttt
gcgacaagcggccacggtattcaaatcaagaacggtactcacaagggccgtctcgtgcag
caatacgcaggcgccttcaccgatggaaccgtgcgcgcctactcggtgtactccgatgat
catggcgccacgtggcacatgggcacgcccgtgggaacgaagatggacgaaaacaaggtt
gtggagctcgccgatggcacgctcatgatgaactcgcgtgctcatgacacgtataccgcg
cgctgggtcgcctattcgaaggacggcggcgagacgtggagcgaaccgtcgctcgaccac
actctcactgatccgcgcaacaacgcgtcgatcatccgcatgaaccccgcggccgctcct
gagtcacgcgcggcacaggaactgctcttctcgaacgccaactcctcgagcggccgcacg
aacggcagcatccgctactcgtgcgactcgggcaagacttggccgacggtcaccacgttc
aatgctggggacacgtcgtactcggatctcgtcgcgctcgaagatggttctttcggtgtg
ttctacgagtccgcgaagaacgagcagcgctacggtgcgttcacgagggagttcctgaac
cccttctgcgcggcctttggcgaggcagctgccgatatcggtgcgggaaacacgagcgag
gtcacattcactctgcgcaatgacgacactcgagatcttgcctctggcacggcgactgtc
gaccttccaaagggctggagcgcacctaccgtggaaaccccggcgctcaagccgggtgag
agcacgacggtcactctcaaggtttcggctcccgcatgggctccgaagggcgaagtgcac
ggcgacgtacgcgtcgcggccgccgacatcaccgttcgcggggatctcgatctcaacgtc
atcaacactgcacccgatactctcggcgcacgatcgtgggaacgcctggcgagcctgaac
gcgacctcgtga
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