Dermabacter jinjuensis: COP05_02850
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Entry
COP05_02850 CDS
T06191
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
djj
Dermabacter jinjuensis
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
djj03016
]
COP05_02850
Enzymes [BR:
djj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COP05_02850
Transfer RNA biogenesis [BR:
djj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COP05_02850
Prokaryotic type
COP05_02850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ATH96148
UniProt:
A0ABN5DM03
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All DBs
Position
631252..632211
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AA seq
319 aa
AA seq
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MSKKRAGQGPHGFLLLDKPAGLTSHDVVARVRYHLNTRKVGHAGTLDPAATGLLLLGVGH
GTKLLTYAVGLDKTYEATIRLGHATVTDDAEGERLGDVAPAHELRALKEDRSRLESAIGD
LTGDIEQVPSAVSAIKVGGVRSYARVRGGEEVELAARPIRVERFEIRDLRMAGDFLDVDC
VVDCSSGTYIRALARDLGAALGVGGHLTALRRTRVGDFTVDNAQRIPERDAPRAAEDPSG
GLHLTPLGEAALSFLPLLPVSEREAAALRYGQWIEAPQASEPETYPAAAIVPPTGELVAI
VEPAPKRGLLKSASVVPRL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaacgcgcggggcaggggcctcacggtttcctcctcctcgataagccggcg
ggcctgacgagtcacgacgttgtcgcgcgcgtgcgctaccacctcaatacgcgcaaggtc
ggccacgcgggcacgcttgaccccgccgcgacgggcctcctccttctcggcgtagggcac
ggcacgaagctgctcacctatgccgtgggactcgataagacctatgaagcgacgattcga
ctcgggcatgcgaccgtcacggacgatgcggaaggtgagcggcttggcgacgttgccccc
gcgcatgagctgcgtgcgctgaaggaggatcgcagcaggctcgagagcgccatcggtgac
cttacgggagatatcgagcaagtcccgagcgccgtgagcgcaatcaaggtgggcggcgtg
cgctcctacgcccgcgtgcgcgggggagaggaagtcgaactcgccgcgcgccccattcgc
gtggagcgcttcgagattcgtgatctccgcatggcaggagacttcctcgacgtggattgc
gtcgtggactgcagctccggcacctacatccgtgcgcttgcacgcgacctcggcgctgcc
ctcggagtaggcgggcacctcaccgctttacggcgcacgcgcgtgggcgacttcaccgtg
gacaacgcccagcgaattcccgagcgcgatgcgccgcgcgcggcagaggacccctcggga
ggattgcacctcacgccgctgggggaagcggccctgtcgtttttgcctttgctgcccgtg
agcgagcgcgaagctgcggcgctcagatatgggcaatggattgaggctcctcaagcgtcg
gaacccgaaacctacccggcggccgcgatcgtgccgcccacgggtgagctcgtggcaatc
gtcgaaccggcccccaaaagaggcctcctcaagagcgcgagcgttgtaccgcgcctctaa
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