Dermabacter jinjuensis: COP05_03240
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Entry
COP05_03240 CDS
T06191
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COP05_03240
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
djj01007
]
COP05_03240
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
djj03016
]
COP05_03240
Enzymes [BR:
djj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
COP05_03240
Amino acid related enzymes [BR:
djj01007
]
Aminoacyl-tRNA synthetase
Class II (U)
COP05_03240
Transfer RNA biogenesis [BR:
djj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COP05_03240
Prokaryotic type
COP05_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ATH96219
LinkDB
All DBs
Position
712495..715089
Genome browser
AA seq
864 aa
AA seq
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MPRIPLSWLGEHVELADGATAEAVAASLVSVGLEEEGIFGAQVTGPLVVGRVLNLVKETH
KNGKTVNWCRVDVGDAHNEALDNPKDPQPGEEVPSRGIICGAHNFVEGDLVVVSLPGTVL
PGNFEIAARKTYGHISDGMICSTSELGLGEDSEDGIIVLGRGIADGIEAKPGDDAIALFG
LDEEVVEINVTPDRGYCFSMRGVAREYSHATGARFTDPALEIEVPEASGEGIQVLLEDDA
PIRGNVGATSYVAQRVNGVDTSAPSPRWMQQRLSLAGMRPISLIVDVGNYVMLDLGQPLH
MFDAAKLTEPIVVRRAKPGEVLTTLDDKARTLHPEDLVVADSTGGHGARPVALAGVMGGS
ETEVDASTADVVIEAAHFDPTTQARTARRHKLVSEAGKRGERGVDPALVEVAARRAAQLL
VEYGGGTLDSNRTHARAGKEVATEISLPLDYAERVVGVAYTREQVVGSLEKIGCAVSSAA
GGDNGEETVTVVPPTWRGDLRIPEDLVEEIARLEGYDAIASRLPSAPGGRGLTRAQRARR
AVANALAEAGATEVVSFPFTNDKTFAKLRLPEDSPLRNAVRLLNPLADDEPLMRTAILET
LLPVAQRNLARGEDSVAVFESGLVFEKRGERVPVPSASSRPSDAELEEIASSLAKQDRHV
ALVAGGPITAAGPLTEPRVWDWADAIAFARRVAAAAGTELVVEQGTASAFHPGRTAILST
VEGERVGVAGELHPAVIKAFSLPKNAAAFELDLEAVIESAPAVVPAEPISTFPIAKEDFA
FVVNDDTPAEAVRAALIVGIGDVAEEVRLFDEYRGDQVPEGKKSLAFAVRLRPHEKTLKG
AEIDEIRARAIAAVESAVGGELRA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcattcccctttcatggctcggcgaacacgttgagcttgccgatggcgctacc
gccgaggctgtcgcagcctcgctcgtctccgtcggcctcgaggaagaaggtatctttggc
gctcaggtcacggggcccctcgtcgtgggccgcgtcttgaacctcgtcaaggaaacccac
aaaaacggcaagaccgtcaattggtgccgcgtcgacgttggcgatgcgcacaatgaagca
ctcgacaacccgaaagatccgcagcccggcgaagaagtgccgagccgcggcatcatttgc
ggtgcgcacaactttgtcgagggtgacctcgtcgtggtgtcgcttcccggaaccgttctt
cccgggaacttcgagattgcggcacgcaagacctatggtcacatttccgacggcatgatc
tgctcgaccagcgagctgggcctcggcgaggatagcgaggacggcatcatcgttctcggc
cgcgggatcgccgacggtatcgaagcgaagccgggcgatgacgcgatcgccctttttggc
ctcgatgaggaagtcgttgagatcaacgtgacgcccgatcgcggctactgtttctcgatg
cgaggtgttgcacgcgagtactcccacgcgaccggggcgcgtttcaccgaccccgccctt
gagattgaggtgcccgaggcgagcggcgaggggattcaggtcctcctcgaagatgacgcc
ccgatccgcggcaacgtcggcgcgacctcctatgtcgcccagcgcgtgaacggcgtggac
acctcggcgcctagccctcgctggatgcagcagcgcctttcgctcgctggcatgcgcccg
atctcgctcatcgtcgacgtcggcaactacgtcatgctcgatctcggccagccgcttcac
atgttcgatgccgcgaagcttacggaaccgatcgtggtgcgccgcgctaagccaggcgag
gtgctcacgactctcgacgacaaggcccgcacgcttcaccccgaggacctcgtggtggcg
gactcgaccgggggtcatggcgcacgtcccgtcgcgctcgcgggcgtcatgggcggaagc
gaaaccgaagtcgatgcgtcgaccgccgacgtcgtgattgaggctgcgcacttcgacccg
acgactcaggcgcgcaccgcgcgccgccacaagctcgtgtccgaggccggcaagcgtggc
gagcgcggggtcgatcctgcgctggtggaggttgcagctcggcgtgccgcccagctcctc
gtcgagtacggcggtggaacgcttgactcgaaccgaacgcacgcgcgcgccggaaaggag
gtcgcgaccgaaatttcgctgcctcttgactacgcggagcgtgtcgtgggcgttgcatac
acgcgtgagcaggtcgtcgggtcgctcgagaagatcggctgcgccgtatcctccgccgcc
ggcggagacaacggggaggaaactgtcacggttgttccgcccacgtggcgcggcgatctt
cgcatccccgaggacctcgtcgaggaaattgcgcgactcgagggttatgacgcgattgcg
tcgaggctgccgtcggcccccggcggacgcggcctcactcgcgctcagcgggcgagacga
gccgtcgcaaatgccctcgctgaggcgggcgcgaccgaagtcgtgagcttcccgttcacg
aacgacaagactttcgcgaagcttcgtttgccggaggattctccgctgcgcaatgcggtg
cgactgctcaatccgctcgctgacgatgaaccgctcatgcgaacggcgattctcgaaact
cttctccccgtggcccagcgcaatctcgcgcgcggcgaggattcggttgcggtcttcgag
tccggtctcgttttcgaaaagcgaggcgaacgcgttcctgtgccgagtgcttcctcgcgc
cccagcgatgccgagttggaggagatcgcttcctcgctcgcgaagcaagatcgccacgtt
gcgctcgtggcgggcggtcccatcactgctgcggggccgttgaccgagcctcgtgtgtgg
gactgggccgatgcgattgccttcgcgcgtcgcgtcgctgccgctgccggcaccgaactc
gtggtggaacagggaacagcgagtgctttccacccgggtcgcacggcgatcctgtcgacc
gttgagggggagcgtgtgggcgttgccggcgagcttcacccggcggtcatcaaggcgttc
agtcttccgaagaatgcggctgcgttcgagcttgatctcgaagccgtgattgagtccgca
cccgccgtggtgccggcggagccgatctcgacgttcccgatcgccaaggaagattttgcg
ttcgtcgtgaatgacgacacgcccgccgaggccgtgcgtgcggccctcatcgtggggatt
ggcgatgttgcggaagaggttcgcctctttgacgaataccggggtgaccaggtccctgag
ggcaagaagtcgctcgcattcgccgtacgacttaggcctcatgagaaaacgctcaagggc
gccgagatcgacgagatccgtgcccgagccatcgccgcggttgaatcggccgttggtggt
gagctgcgcgcctaa
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