Dermabacter jinjuensis: COP05_03350
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Entry
COP05_03350 CDS
T06191
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj00260
Glycine, serine and threonine metabolism
djj00460
Cyanoamino acid metabolism
djj00630
Glyoxylate and dicarboxylate metabolism
djj00670
One carbon pool by folate
djj00680
Methane metabolism
djj01100
Metabolic pathways
djj01110
Biosynthesis of secondary metabolites
djj01120
Microbial metabolism in diverse environments
djj01200
Carbon metabolism
djj01230
Biosynthesis of amino acids
djj01240
Biosynthesis of cofactors
djj04981
Folate transport and metabolism
Module
djj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
COP05_03350
09102 Energy metabolism
00680 Methane metabolism
COP05_03350
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
COP05_03350
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
COP05_03350
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
COP05_03350
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
COP05_03350
Enzymes [BR:
djj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
COP05_03350
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Phage_HCP
Motif
Other DBs
NCBI-ProteinID:
ATH96233
UniProt:
A0ABN5DM39
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All DBs
Position
736823..738091
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AA seq
422 aa
AA seq
DB search
MSTHSESIATVDPEIAKVLDQELHRQQTTLEMIASENFVPRAVLQAQGSVLTNKYAEGYP
GKRYYGGCEFVDVAENLAIERAKSLFGADHANVQPHSGASANAAVMHALASAGDTLMGLS
LAHGGHLTHGMKINFSGKLYNIAAYEVDPETGRIDMDRVRAQALEAHPNVIVAGWSAYPR
QLDFEAFRSIADEVGAKLWVDMAHFSGLVAAGLHPSPVPFADVVSTTVHKTLAGPRSGLL
LAKQDFAKKVDSAVFPGQQGGPLMHVIAAKAVALKLAASDEFKERQKRTLEGAQILAERL
GQADAKEAGIELLSGGTDVHLVLVDLRKSEIDGQQAEDLLHEIGITVNRNAVPNDPRPPR
VTSGLRIGTPALATRGFGASEFTEVADIIATALTGKGDVEQLRGRVRTLAENTPLYADLT
QY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcatagcgaatcgattgccacggtcgacccggagatcgccaaggttctcgat
caggaactgcatcgccagcaaaccacccttgaaatgatcgcgagcgagaactttgttccg
cgggcggttcttcaggcccaggggtcggttctcacgaacaaatacgccgagggctacccg
ggcaagcgctactacggtggctgcgagttcgtggacgtcgcggaaaacctggcaattgag
cgtgcgaagtcccttttcggtgctgaccacgcgaacgtgcaaccccactcgggtgcgtcc
gcaaacgcggctgtgatgcatgctctcgcaagtgctggcgacacccttatggggctttcc
ctcgcgcacggcgggcacctcacccacggcatgaagatcaacttttcgggcaagctctac
aacatcgcggcctacgaggtcgaccccgagaccggtcgcatcgacatggatcgtgtgcgc
gcgcaagcgctcgaggcgcacccgaacgtgatcgttgccgggtggtcggcgtacccgcgc
cagctcgactttgaagcattccgctcgatcgccgatgaagttggcgcgaagctgtgggtc
gatatggcgcacttctcgggtcttgtggccgcaggtctccacccgagcccggtgccgttt
gccgatgtcgtttcgacgaccgttcacaagactctcgcgggtccccgctcgggccttctt
ctcgccaagcaggatttcgcgaagaaggttgactcggcggtgttccctggccagcagggc
ggcccgctcatgcacgtgatcgctgcgaaggcggtcgcactgaagctcgccgcgagcgac
gaattcaaggaacgccagaagcgcacgctcgagggcgcgcagattctcgctgagcgcctc
ggtcaggctgacgcgaaagaagctggcatcgagctcctctcgggcggtaccgacgttcac
ctcgtactcgttgacctccgcaagtccgagatcgacgggcagcaggccgaggatctcctc
cacgagatcggcatcaccgtgaaccgcaacgcggtcccgaatgatccgcgtccgccgcgc
gtgacgtcgggtcttcgcattggtacgccggcgcttgcgacgcgtggtttcggtgcgagc
gaattcacggaggtcgctgacatcatcgcgaccgcacttaccggcaagggggatgtcgag
cagctccgagggcgcgttcgcacactcgcggaaaacacacccctgtacgccgacctcacc
cagtactga
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