Dermabacter jinjuensis: COP05_04880
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Entry
COP05_04880 CDS
T06191
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03030
DNA replication
djj03430
Mismatch repair
djj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COP05_04880
03430 Mismatch repair
COP05_04880
03440 Homologous recombination
COP05_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
djj03032
]
COP05_04880
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_04880
Enzymes [BR:
djj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COP05_04880
DNA replication proteins [BR:
djj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COP05_04880
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COP05_04880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
RNase_H_2
DUF7508
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ATH96495
UniProt:
A0ABN5DMR6
LinkDB
All DBs
Position
complement(1070887..1072647)
Genome browser
AA seq
586 aa
AA seq
DB search
MQRAFEDLGPELIDVEFVVVDLETTGTNTELDAITEIGAVRVVGGEVVEEFQTFINPERP
IPAYIAALTGISDHMVRDAPSAEAAIPAFLEFARTSVLVAHNARFDIGFLKAAALQLDYR
WPPFEVVDTLTLARRVFGRDEVKNHKLSTLAGAVGATTVPNHRALSDARATVDVLHEIIA
RLSAGGASHLSDLTSNGKKASPAQIRKRHLAADIPPVPGVYSFVDANGSTLYIGKSGNLR
SRVRTYFSPNETRRAVLDIIPVTERIDIVQCSSDAEAAIRELRAIASERPIANRQGIRPS
KSNWLRVTHDGLRLARTVKSETSLHAYIGPLRSRHDVEPIRSLVYAALTAAIGAEEENAG
AAEGRTGTESPTVPREPSAAAGGLPVPPVHGPTFVAEPSEPVRSSASFHARMHRALTEDP
SDVFEYAAKKMRALVGRGLYENAEALRTRVELFTDAARRAARLRSIAEVPLLVAARKISC
HDASAESPWQWEVLAVRHGRLGAARTMPAWSDPLSAIEALARESEAEAALRAPLCFGYHH
EAELILEWLAKPGIRIVHVDGEWSMPSTARFTIEEFQRVFRRSARR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgggcattcgaggatctcggcccggagctcatcgacgtcgagttcgtcgtcgtc
gacctcgagaccaccggaacgaataccgagctggatgccatcacggaaattggcgccgta
cgggttgtgggtggcgaggttgtcgaggagtttcaaaccttcatcaacccagagcgcccg
atccccgcatacattgccgcgctcacggggatctctgaccacatggttcgcgatgcgccg
tccgcagaagcggccatccccgctttcctcgagttcgcacgcacctcggtgctcgtcgca
cacaacgcacgcttcgacatcggttttttgaaggcggccgctcttcaactcgactaccgg
tggccccctttcgaggtcgtcgatacgctcacactcgcgcgccgcgttttcggacgtgac
gaagtgaagaaccacaagctttcgactctcgcgggagcggttggggcaacgacggtgccc
aaccaccgcgcgctgtcggatgcgcgcgcaacggtcgatgttctccacgagatcatcgcg
cgactttctgccggtggcgcaagccacctctcggatctcacctcaaacgggaagaaagca
agccccgcccaaatccgtaaacgccacctcgcggcggacatcccgcccgtgcccggcgtg
tactccttcgtcgacgccaacggttcaacgctgtacatcggcaagtcgggcaatctccgc
tcgcgagtgcgcacctacttttcaccgaacgagaccaggcgagccgtcctcgatatcatt
cccgtcaccgagcgtatcgacattgtgcagtgttcaagcgacgccgaagctgcaatccgc
gagctgcgcgcaatcgcgagtgagcgccccatcgccaatcgccagggaatccgcccttcc
aagagcaattggcttcgagtcacccacgatgggctgcgccttgcgcgcactgtgaaaagc
gaaacgtcgctccacgcctatatcggcccgctccgctcgcgccacgacgtcgagccgatt
cgctccctcgtgtacgcggcactgactgcggccatcggggctgaagaggagaacgctggt
gccgcggaaggtcgcaccgggaccgaaagtccgacggttccccgggaaccgtcggcagcc
gcgggtgggttgccggtgccgccggttcatggaccgacgtttgtcgcagaaccgtcggag
cccgtgcgcagcagcgcaagcttccacgcacgaatgcaccgggccctcaccgaggatccg
agcgatgtttttgagtacgcggcgaagaagatgcgggcgctcgtggggaggggactctac
gagaacgccgaggcgctgcgcacgagggttgagttgtttactgatgccgcacggcgtgcc
gcgcggttgcgatcgatcgcggaggttccactcctcgtcgcggcgcgcaaaatctcgtgc
cacgacgcttcggctgaatcaccgtggcagtgggaggttcttgccgtacggcacgggcgg
ctcggggcagcgcgcacaatgccggcgtggagcgacccgctttcggctatcgaggcactt
gctcgcgaaagcgaagcggaggccgccctgcgcgccccgctgtgcttcggctaccaccac
gaggctgagctcatcctcgaatggctcgcgaagcctggcatccgaatcgttcacgtggac
ggcgagtggtcgatgccgtctaccgcccgctttacgatcgaagagtttcagcgggtattt
cgacgctctgcgagacgttga
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