KEGG   Dermabacter jinjuensis: COP05_04925
Entry
COP05_04925       CDS       T06191                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
djj  Dermabacter jinjuensis
Pathway
djj02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:djj00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    COP05_04925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:djj03021]
    COP05_04925
Transcription machinery [BR:djj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     COP05_04925
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: ATH96503
UniProt: A0ABM6PLN4
LinkDB
Position
1082597..1084132
AA seq 511 aa
MSTSTSKKEEVTKNIEALTSALDGATSVSYEALKASAKSLGISPYKVASLSNKLEETGIE
ILDRPSDSRKKKAASKSAGASKGDAADSAEASKSAPKSGKKAASKKDTSKKTASSAQSEP
EAETTEQDAPREKDGSEETESKASRKRAAKRTSAKKAGKRGTKKEDSAAEGSSGADDTDS
ADDDDPSKGFALTNDDDDSPAQQVVTAGATADPVKDYLKQIGKVALLNAVQEVELAERIE
AGLYAEHKLKQDPSLKKSIEGRDLELIVADGKAAKDHLLEANLRLVVSLAKRYTGRGMLF
LDLIQEGNLGLIRAVEKFDYAKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVIN
KLARVQRQMLQDLGREPLPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGD
LIEDSEAVVPADAVSFTLLQEQLHSVLDTLSERESGVVAMRFGLEDGQPKTLDEIGKVYG
VTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1536 nt   +upstreamnt  +downstreamnt
gtgtcgacgagcacgtctaagaaagaagaagtcacgaagaacatcgaggccctcacgtcg
gctctcgatggagcgacttcggtgagctacgaggccctcaaggcctccgccaagtccctc
ggtatctccccgtacaaggttgcatcgctctccaacaagctcgaggagaccgggatcgag
atcctcgaccgtccgagcgactcccgcaagaagaaggcagcctcgaagagcgccggcgcg
agtaagggcgatgccgctgattccgccgaggcctcgaagagcgccccgaagagtggcaag
aaagctgcgtcgaaaaaggacacctcgaagaagaccgcttcgagtgcgcagagcgagccc
gaagcggagacgaccgagcaagacgctcctcgtgaaaaagacggctccgaagaaacagaa
tcgaaggcctcgcgcaagagggctgccaagcgtacgtcggcgaagaaggccggcaaacgc
ggcaccaagaaagaagattctgctgcggaaggctccagcggcgcagacgacaccgactcc
gccgacgacgacgatccgagcaagggcttcgcgctcacgaacgacgatgatgattcgccg
gctcagcaggttgtgaccgccggcgccactgccgacccggtgaaggactacctcaagcag
atcggcaaggtcgcgctgctcaatgccgtccaggaggttgagctcgccgaacgcatcgag
gccgggctctatgccgagcacaagcttaagcaagatccatcgctcaagaagagcatcgag
ggccgcgacctcgaacttatcgttgctgacggcaaggccgcgaaggaccacctgctcgag
gcaaacctccgactcgtcgtgtcgctggcaaagcggtatacgggccgcggcatgctcttc
cttgacctcattcaggagggcaacctaggtctcattcgcgccgtagagaagttcgattac
gcgaagggctacaagttctcgacctacgcgacctggtggattcgtcaggcgatcacacgt
gcgatggcagaccaggcccgcacgatccgcatcccggttcacatggtcgaggtcatcaat
aaactcgcacgcgttcagcgccagatgctccaggatctcggccgcgagccgcttccagaa
gaactcgcgaaggaactcgatatgactcccgaaaaggtcgtcgaggtccagaaatacggc
cgcgagcccatctcgctgcacaccccgcttggcgaggatggcgacagcgagttcggtgac
ctcatcgaagactccgaagccgttgtgcccgcagatgccgtgagcttcacgcttttgcag
gaacagcttcactccgtactcgatacgctcagcgagcgcgaatccggtgtggtcgcgatg
cgtttcggcctcgaggacggccagcccaagaccctcgacgaaatcggcaaggtctacgga
gtgacgcgcgagcgtatccgccagatcgagtcgaagaccatgagcaagctccggcacccg
tcgcgctcgcaggtccttcgcgattacctcgattaa

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