Dermabacter jinjuensis: COP05_04925
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Entry
COP05_04925 CDS
T06191
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
djj
Dermabacter jinjuensis
Pathway
djj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
COP05_04925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
djj03021
]
COP05_04925
Transcription machinery [BR:
djj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COP05_04925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ATH96503
UniProt:
A0ABM6PLN4
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All DBs
Position
1082597..1084132
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AA seq
511 aa
AA seq
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MSTSTSKKEEVTKNIEALTSALDGATSVSYEALKASAKSLGISPYKVASLSNKLEETGIE
ILDRPSDSRKKKAASKSAGASKGDAADSAEASKSAPKSGKKAASKKDTSKKTASSAQSEP
EAETTEQDAPREKDGSEETESKASRKRAAKRTSAKKAGKRGTKKEDSAAEGSSGADDTDS
ADDDDPSKGFALTNDDDDSPAQQVVTAGATADPVKDYLKQIGKVALLNAVQEVELAERIE
AGLYAEHKLKQDPSLKKSIEGRDLELIVADGKAAKDHLLEANLRLVVSLAKRYTGRGMLF
LDLIQEGNLGLIRAVEKFDYAKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVIN
KLARVQRQMLQDLGREPLPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGD
LIEDSEAVVPADAVSFTLLQEQLHSVLDTLSERESGVVAMRFGLEDGQPKTLDEIGKVYG
VTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgagcacgtctaagaaagaagaagtcacgaagaacatcgaggccctcacgtcg
gctctcgatggagcgacttcggtgagctacgaggccctcaaggcctccgccaagtccctc
ggtatctccccgtacaaggttgcatcgctctccaacaagctcgaggagaccgggatcgag
atcctcgaccgtccgagcgactcccgcaagaagaaggcagcctcgaagagcgccggcgcg
agtaagggcgatgccgctgattccgccgaggcctcgaagagcgccccgaagagtggcaag
aaagctgcgtcgaaaaaggacacctcgaagaagaccgcttcgagtgcgcagagcgagccc
gaagcggagacgaccgagcaagacgctcctcgtgaaaaagacggctccgaagaaacagaa
tcgaaggcctcgcgcaagagggctgccaagcgtacgtcggcgaagaaggccggcaaacgc
ggcaccaagaaagaagattctgctgcggaaggctccagcggcgcagacgacaccgactcc
gccgacgacgacgatccgagcaagggcttcgcgctcacgaacgacgatgatgattcgccg
gctcagcaggttgtgaccgccggcgccactgccgacccggtgaaggactacctcaagcag
atcggcaaggtcgcgctgctcaatgccgtccaggaggttgagctcgccgaacgcatcgag
gccgggctctatgccgagcacaagcttaagcaagatccatcgctcaagaagagcatcgag
ggccgcgacctcgaacttatcgttgctgacggcaaggccgcgaaggaccacctgctcgag
gcaaacctccgactcgtcgtgtcgctggcaaagcggtatacgggccgcggcatgctcttc
cttgacctcattcaggagggcaacctaggtctcattcgcgccgtagagaagttcgattac
gcgaagggctacaagttctcgacctacgcgacctggtggattcgtcaggcgatcacacgt
gcgatggcagaccaggcccgcacgatccgcatcccggttcacatggtcgaggtcatcaat
aaactcgcacgcgttcagcgccagatgctccaggatctcggccgcgagccgcttccagaa
gaactcgcgaaggaactcgatatgactcccgaaaaggtcgtcgaggtccagaaatacggc
cgcgagcccatctcgctgcacaccccgcttggcgaggatggcgacagcgagttcggtgac
ctcatcgaagactccgaagccgttgtgcccgcagatgccgtgagcttcacgcttttgcag
gaacagcttcactccgtactcgatacgctcagcgagcgcgaatccggtgtggtcgcgatg
cgtttcggcctcgaggacggccagcccaagaccctcgacgaaatcggcaaggtctacgga
gtgacgcgcgagcgtatccgccagatcgagtcgaagaccatgagcaagctccggcacccg
tcgcgctcgcaggtccttcgcgattacctcgattaa
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