Dermabacter jinjuensis: COP05_05550
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Entry
COP05_05550 CDS
T06191
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COP05_05550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_05550
Enzymes [BR:
djj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COP05_05550
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COP05_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
ATH96614
LinkDB
All DBs
Position
complement(1223327..1225282)
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AA seq
651 aa
AA seq
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MLGTLAHLDRPFEYAVPAALDAVEPGMRVRVRFSGREHEALVRARYERPDTTRPLAPLVS
VVSEDVLLSEHMFRVCEDVAQRYAGSLSDVLRLAVPARSAGAEKAHRARMERHAREKSGA
PDKKTASTGAANPQCEKYRSKFAGLGAFLEHSRGGDRTPRASIVLDPVDSWIELVLECLS
GLEDDAGAIILASDQRDVDRLAKALTAHAIDHVQFGSAQGPHARYTAFLSTLQGRSRLVI
GTRSAVFAPVANLRMILVWDPDDDLYEEPRAPYPHARTVALTRSFHENCSLLFVSRAPSE
FARYLTLAGTLAALEPVPAAHAHTHPRIELMDAYLREREGASGFSRLPSHAHAVIRRGLA
EGPVLVHVPRAGYAPALACRFCGTKATCVHCHATLAAPGRGELSCSVCSRRYGHYRCQEC
GGADLRPIVLGQERTAADLKRSFPNATLHVSGGASGIVEDSDVRDGDLVIATPGAEPQPE
GGYAASVIIDAAASLGRAAYNADCETIRRYSHVIGQTRTFDKGGQVLIVGPDQHPALRSL
VLVRSNAFIDRVLEERAELGLPPAFKVLEVRGDRTACTDFLERIDAPRGVDIFGPTEVES
STIDAEARVVLRCPVKHAPALVEAARAVMLVRSAKKHPGSLRLQVDPPHVF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggtactctcgcgcacctcgatcgccccttcgagtacgcggtccccgcggctctc
gatgctgttgagcccgggatgagggtgcgcgtgcgattctccgggcgcgagcacgaggcg
ctcgtacgggcacgctacgaaagacccgacactacccggccgctcgcaccgctcgtgtcc
gtcgtaagcgaggacgttctcctttcggagcacatgtttcgggtgtgcgaggacgttgcg
cagcgctacgcgggatcgctcagcgacgtgctgcgactcgccgttcccgcgcgcagcgca
ggcgcggaaaaagcacaccgggcgcgcatggagcgccacgcacgggaaaaatctggcgca
cctgataagaagactgcttcgaccggtgccgctaaccctcagtgcgagaagtaccgttcc
aaattcgcggggctcggggctttcctcgagcactcacgaggtggagaccgtactccgcgg
gcgtcgatcgttctggatccggtggattcgtggattgaactcgtgctcgaatgcctgtcg
ggacttgaggatgatgcgggagcgatcatcctcgcgagtgatcagcgggacgtcgatcga
ctggcaaaggccctcacggcgcacgcgatcgaccacgtccaattcggtagcgcacagggc
cctcatgcgcggtacacggcgtttctgtccacactccaggggcgctcacgcctcgtcatc
gggacgcgcagcgctgtttttgctcccgtggcaaacctccgcatgatccttgtatgggat
ccggatgacgacctctacgaagaaccacgagcgccctacccccacgcgcgcactgttgca
ctcacgcgaagcttccacgaaaactgttccctgctcttcgtttcgcgggcaccgtcggaa
ttcgcccgctacctcacccttgccggcactctcgcggctctcgaacccgtgcccgccgcc
catgcccatactcacccacgtatcgagctcatggacgcgtacttgcgtgagagagagggg
gcaagcgggttttcgcgtttgccgtcgcacgcccacgcggttatacgccgagggcttgcg
gaagggcccgtgctggtccacgtgccgcgagcgggatacgccccggcactcgcgtgtcga
ttctgcgggaccaaggcgacgtgcgtgcattgccacgcgactctcgctgcgcctggaaga
ggggaactatcgtgcagcgtgtgttctcgtcggtacggccactatcggtgccaggaatgc
gggggagcggatctgcgccccatagtcctcggccaagaacgcaccgctgccgatttgaag
cgctccttcccgaacgcaacgctccacgtatcgggcggggcctccggaattgtggaggat
tctgacgttcgcgacggcgacctcgtgattgcaacgccgggcgcagagccgcagcccgag
ggcggatacgcggcgtcggtgatcatcgacgcggccgcctccctcggcagagccgcctac
aacgccgactgcgaaacaatccgccgttactcccatgtgatcggccagacccgcacgttc
gacaagggcgggcaggtgttgatcgttggacccgatcagcaccccgcacttcgttcgctc
gttctcgtgcgctcgaacgcatttatagaccgagtgttggaagaacgcgccgaactcggg
cttccccctgcgtttaaggtcctcgaggtgcgaggagaccgaacggcgtgcaccgatttc
ctcgaacggatcgatgcgccgcgaggcgtcgacatttttggccccacggaggtcgagtct
tccaccattgatgccgaagcgcgcgttgtgctccggtgcccggtcaagcacgcgcctgca
ttggtggaggcggcgcgagccgtgatgctcgtgcgtagcgcaaagaagcatccgggctcc
cttcgccttcaggttgaccccccgcatgtcttctag
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