Dermabacter jinjuensis: COP05_05875
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Entry
COP05_05875 CDS
T06191
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COP05_05875
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
djj01007
]
COP05_05875
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
djj03016
]
COP05_05875
03029 Mitochondrial biogenesis [BR:
djj03029
]
COP05_05875
Enzymes [BR:
djj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
COP05_05875
Amino acid related enzymes [BR:
djj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
COP05_05875
Transfer RNA biogenesis [BR:
djj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COP05_05875
Mitochondrial biogenesis [BR:
djj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
COP05_05875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
PHA_synth_III_E
Zn_Ribbon_Prim
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ATH96666
UniProt:
A0ABM6PKX8
LinkDB
All DBs
Position
complement(1287447..1288835)
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AA seq
462 aa
AA seq
DB search
MAKPQPSKLDNVIALAKKRGFVFPAGDIYGGTRSAWDYGPLGVELKENIKRQWWRTFVTS
RADMVGLDSSIILPTRVWEASGHVKTFTDPLIECRSCHNRFREDHLVEEFEERKGRKAEG
MSEIPCPNCGTKGEYTEPQQFSGLMKTYLGAVDNEEGLHYLRPETAQGIFVNFLNVVTAA
RVKPPFGIGQVGKSFRNEITPGNFIFRTREFEQMEIEFFTPPEQAGAFFDEWVEACEKWF
FDLGIKPENIRRFDVPEGERAHYSDATIDLEYRFGFQGSEWGELMGVANRTDFDLASHTE
ASGTKMQYFDQASGERYTPYVIEPSFGLTRSMMAFLIDAYEEDEAPNTKGGVDKRTVLKL
DPRIAPVKVAVLPLSKSEDLQPTAHNLASELRGLWNIDMDLSGAIGRRYRRQDEIGTPYC
VTVDFDTLDDQAVTVRDRDTMAQERVALSQIKGYLAERLAGC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagccccaaccgtcgaagcttgataacgtcatcgccctcgcgaagaagcgcgga
tttgtgttccccgccggcgatatttacggcggcacgcgttcggcgtgggactacggcccc
ctcggtgttgagctcaaggagaacatcaaacgccagtggtggcgcacgttcgtgacttcg
cgcgccgacatggtgggcctcgactcctcgattatcctgcctactcgcgtatgggaggcc
tcggggcacgtcaagaccttcacggacccgctcatcgaatgccgcagctgccacaaccgc
ttccgcgaggatcacctcgtggaggagttcgaggaacgcaaggggcgtaaagccgagggc
atgagcgagatcccatgcccgaactgtggcaccaagggcgagtacaccgagccccagcag
ttctcgggtctcatgaagacctacctcggcgcggtcgacaacgaggagggcctgcattac
cttcgccccgaaacagcgcagggcattttcgtcaacttccttaacgtcgtcaccgctgcg
cgcgtgaagccgcctttcggcattggccaggtcggcaagtccttccgcaacgagatcact
cccggcaactttattttccgcacccgcgaatttgaacagatggagatcgagttctttacc
ccgccggagcaagccggcgcatttttcgacgagtgggtcgaggcgtgcgagaaatggttt
ttcgatctcggtatcaaaccggaaaatattcgtcgctttgacgttccggaaggggagcgt
gcccactattcggatgccaccatcgacctcgagtaccgctttggtttccagggcagcgaa
tggggcgaactcatgggcgtcgctaaccgtactgacttcgacctcgcaagccacacggaa
gcttcgggcacgaagatgcagtacttcgaccaggcaagcggcgaacgctacactccctac
gtcatcgagccgtcgtttggtcttacgcgttcgatgatggcgttccttattgacgcctac
gaagaagacgaggctcccaacaccaagggcggagtcgataagcgcaccgttctcaaactt
gatccgcgtatcgcgcctgtcaaggtcgccgtgcttccgctatccaagagtgaggacctt
cagcccaccgcgcacaacctcgcctcggagctgcgcgggctatggaacatcgatatggac
ctctccggtgcgatcggtcgacgctaccgtcgccaggatgaaattggcacgccttactgc
gtcacggtcgacttcgacacgctcgacgatcaggccgtgaccgtgcgcgatcgagacacc
atggctcaagagcgcgtagccctctcccagatcaagggctacctcgccgagcgtcttgcg
ggatgctag
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