Dermabacter jinjuensis: COP05_05990
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Entry
COP05_05990 CDS
T06191
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03030
DNA replication
djj03430
Mismatch repair
djj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COP05_05990 (holA)
03430 Mismatch repair
COP05_05990 (holA)
03440 Homologous recombination
COP05_05990 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
djj03032
]
COP05_05990 (holA)
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_05990 (holA)
Enzymes [BR:
djj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COP05_05990 (holA)
DNA replication proteins [BR:
djj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COP05_05990 (holA)
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COP05_05990 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delt_C
Peptidase_M60
Motif
Other DBs
NCBI-ProteinID:
ATH96687
UniProt:
A0ABM6PMD6
LinkDB
All DBs
Position
complement(1310238..1311227)
Genome browser
AA seq
329 aa
AA seq
DB search
MAEVQWHSIEPAPVVLIAGKEALLAQRALERIVRLSRERHADLEIHRFTSTEITKSDVLQ
YTAPSLFGEPRLVIIDEVTRGAEPLINALMEYVQSPEQDVTLVLINRGDQRAKKLLDAVK
KSGAPWVNAAEIKTAKAKMTFAMSEFSRARRRVNSDAVKALVDAFGADLMELAAVSTQLM
RDTEPEPGQQAGPITLRHVEALTAGRAETTGFAIADACLAGKEREALVLLRQAELSGLSP
VAIVATIVRKARQVAQAAIPGATAKSTGMQDWMFRNNAQLARHYSERALASVFESLAAAD
AAVKGNDRDPMWALQRLIVEISRARRGRA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtccagtggcacagtatcgaacccgcgcccgttgtgcttatcgcgggcaag
gaagcgctcctcgcccagcgcgcgctcgaacgcatcgtccggctcagtcgcgaacgccac
gccgatcttgagatccaccgtttcacctcaaccgaaattaccaagagcgacgtccttcaa
tacacggccccctcgcttttcggcgagccacgcctcgtcatcatcgatgaggtgacacgc
ggcgcggagcctctcatcaacgctcttatggaatacgtgcagagtcccgagcaggacgtc
acgctcgtgctcatcaatcgcggtgatcagcgcgccaagaagctcctcgacgccgtgaag
aaatcgggcgctccatgggtgaacgcggcagagatcaaaaccgcgaaagcaaagatgacc
ttcgcgatgagcgagttttcacgcgcgcggcgccgcgtcaactccgatgcggttaaagct
ctcgtcgatgccttcggggcagacctcatggaactagcggccgtgagcacccaactcatg
cgcgacaccgagcccgagccgggtcagcaggctggccccatcacgctcaggcacgtcgag
gctcttacggcaggccgcgcggagacaacgggatttgcgatcgccgacgcctgcctcgcc
ggcaaagaacgcgaagcgctcgtgctgcttcgccaagccgaactctcggggctgtctccc
gtcgccatcgtcgcgacgattgtgcgcaaggccaggcaggtggcgcaggcagcgattccc
ggtgcgacggcaaagagcacaggcatgcaggactggatgttccgcaacaacgctcagctc
gcccgccactactcggagcgcgcgctcgcctcggtgttcgaatccctcgccgcagcggat
gccgcggttaagggtaatgatcgtgacccaatgtgggcgcttcaacgccttatcgtagag
atttcgcgcgcgaggagggggcgggcatga
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