Dermabacter jinjuensis: COP05_06270
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Entry
COP05_06270 CDS
T06191
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
djj
Dermabacter jinjuensis
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
djj03016
]
COP05_06270
Enzymes [BR:
djj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
COP05_06270
Transfer RNA biogenesis [BR:
djj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
COP05_06270
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ATH96731
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All DBs
Position
1370364..1371614
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AA seq
416 aa
AA seq
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MTDSHDQLPDPECAPLIKKPAGGTPPLVTTVQGILEWCARVKADEDLAIDVERASSYRYS
AKAYLVQIKTEAAGILLLDPLACQLPGTFTDIMNSHPWILHASRQDLPSLAMLGLEPVAL
FDTEVAARLLGLPKVSLGALTEELLEVRLAKEHSSANWSKRPLPESWLDYAALDVEYLAE
LKTVLTRMLDDAHKTSWAREEFAFEAMFAHPEVPDEPWRGLHGLGQLKSPLQLAVARSMW
ERRDAIARNADVAPFMVLRDKALVAMAKASSKGRQEFDNAAPKNLKHREQWWRCVREARE
LPRVHLPSKRDLGPYPNHRSWSRRYPEVLEAYKQVREGLLTRAEELHMPVENLISPGHMR
HWVWNHFSAEAEHRIPHASPEQIVQELEAVGARPWQAAQVTPAIIESLRSYARSRG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcccacgaccagttgccggatcccgagtgcgcgcccctcattaaaaaaccc
gcgggtggcacgccgcccctcgtcacgaccgttcagggcatcctcgagtggtgcgcgcgt
gtcaaagccgacgaggacctagcgatcgacgtcgagcgcgcttcgagctaccgatactcc
gctaaggcctacctcgtgcagatcaagacggaggcggcagggatattgctgcttgatccc
ctcgcgtgccaactgcctggaaccttcacggacatcatgaactcgcatccgtggattctt
cacgcctcgaggcaggaccttccctcactcgccatgctcgggcttgaaccggtcgcactt
ttcgacaccgaggtagctgcgcgcctcctcggacttcccaaggtgagtctcggggctctc
acggaagaactgctcgaagttcggcttgccaaggaacattcgagcgccaactggtccaag
cgcccacttccggaatcgtggctcgactacgccgcgctcgacgtcgagtacctcgccgaa
ctcaaaaccgtgctcacacgcatgctcgacgacgctcacaagacgtcgtgggcacgtgag
gaatttgccttcgaagccatgttcgcccacccggaagttcccgacgagccgtggcgcggc
ctgcacggcctcggccagctcaaaagccccctgcaactcgcggtcgcacgatcgatgtgg
gaaaggcgcgatgcaatcgcgcgtaatgcggacgtcgcgccgtttatggtgctgcgcgac
aaggcactcgtggccatggcaaaagcctcgagcaagggacgccaagagttcgacaacgcc
gcaccgaagaacctcaagcaccgcgagcagtggtggcgatgcgtccgcgaagcgcgagaa
ctgccccgcgttcacttgccgtcgaagcgcgacctgggcccctaccccaaccatcgttcg
tggtctaggcgttaccccgaggttctcgaggcctacaaacaggtgcgcgaggggctcctc
acgcgcgccgaagagcttcacatgcccgtcgagaatctcatctctcccggtcacatgcgc
cactgggtgtggaatcacttcagtgcagaggccgagcatcgcatcccacacgcgagcccc
gaacagatcgtgcaggagctcgaagcggtcggtgcgcgcccttggcaagccgctcaagtc
acgccagcgatcatcgaatcgctgcgctcgtacgcgcgctcgcgcggttaa
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