Dermabacter jinjuensis: COP05_08060
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Entry
COP05_08060 CDS
T06191
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COP05_08060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
djj03021
]
COP05_08060
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_08060
Enzymes [BR:
djj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COP05_08060
Transcription machinery [BR:
djj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
COP05_08060
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
COP05_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ATH97043
UniProt:
A0ABN5DQX8
LinkDB
All DBs
Position
complement(1751843..1752844)
Genome browser
AA seq
333 aa
AA seq
DB search
MLIAQRPTLTEEVVSDYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTELILNIKNLVVSSENDEPVVMYLRKEGEGVVTAADITPPAGVEIHN
PDLHIATLNSKGRLEVELIVERGRGYVSAQQNKGAESEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLIIDVETKPAIAPRDAIASAGKTLVELFGLAQELNHEAEGIEIGPSPTD
QALAADLALPINDLNLTVRSYNCLMREGVYTVGELTNRSEADLLDIRNFGQKSIDEVKAK
LAELGLSLKDSPAGFDPSTVLDSYGDDEFGEQF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccacgctgaccgaagaggtcgtttctgactaccgctcacgg
ttcgtcatcgagccgctcgagccgggcttcggctacacgctcggcaactcgctgcgccgc
acactgctctcgtccatcccgggcgcggcagtgacgtcgatccgcatcgacggcgtcctc
cacgaattctcgaccgttccgggtgtgaaggaagatgtcaccgagctcatcctgaacatc
aagaacctcgtggtgtcgtcggaaaacgacgagccggtcgtaatgtacctgcgtaaggag
ggtgagggcgtcgtgaccgccgccgacatcaccccgccggcaggcgtcgaaatccacaac
cccgacctgcacatcgcgaccctcaactcgaagggtcgcctcgaggtcgagctgatcgtt
gagcgtggccgcggctacgtttcggcccagcagaacaagggcgccgagagcgagattggc
cgcattccggtcgactcgatctactcgcctgttctcaaggtgacgtacaaggttgaagcc
actcgtgtcgagcagcgcacggacttcgatcgactcatcatcgatgtcgaaacgaagccg
gcgatcgccccgcgcgatgccattgcttcggctggcaagaccctcgtggagctcttcggt
ctcgcacaggagctcaaccacgaggcagagggtatcgagattggtccttctccgaccgac
caggcccttgccgccgaccttgcgcttccgatcaacgacctcaacctcacggttcgttcg
tacaactgccttatgcgcgagggtgtgtacaccgttggtgaactcaccaatcgctccgag
gcggacctgctcgacatccgcaacttcggccagaagtccatcgacgaagtcaaggcgaag
ctcgctgagctcggcctctcgctcaaggattccccggccggtttcgatccttccactgtt
cttgactcgtacggcgacgacgagttcggcgagcagttctga
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