Dermabacter jinjuensis: COP05_08695
Help
Entry
COP05_08695 CDS
T06191
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03420
Nucleotide excision repair
djj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COP05_08695 (pcrA)
03430 Mismatch repair
COP05_08695 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_08695 (pcrA)
Enzymes [BR:
djj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COP05_08695 (pcrA)
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COP05_08695 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
COP05_08695 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Cadherin_2
Motif
Other DBs
NCBI-ProteinID:
ATH97156
LinkDB
All DBs
Position
complement(1877146..1879827)
Genome browser
AA seq
893 aa
AA seq
DB search
MSSLFDDFPLPESFRALGEAGKGSKGEGGTGARAQSGGARGESDACPPPDEWDFSEDAPP
EDWETAFDEQVSQSPNPEAGVSFEPVPDEPEPVRHESFAAWGGRDEAALEEIVEGLNPPQ
RDAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLRSGEALPGEILAITFTNKAASEMKERV
EALIGPAARYMWVSTFHSACVRILRRDAAAAGLKSTFSIYDSADSKRLITNIAKDMGLDS
KRHSPRAFQAKISSLKNELVTPEEYAAQAENAKNPAERTIAQIYTQYQERLRTANAVDFD
DLIALTVRLLAENPGIREGYRRRFRHVLVDEYQDTNTAQYRLVRELVGDDPHADLTVVGD
SDQSIYAFRGATIRNIIEFEQDFPSARTIVLEQNYRSTQTILSAANAVIKENQGRRPKKL
WTDQGEGQQITLYVADDEQGEARYITRQIDALIDEGAKAGDIAVFYRANAQSRALEDQLI
RVGLPYKVVGGTRFYERREIKDAIAYLRVLTNPADEINLRRILNTPKRGIGERAEAAVSV
LAEQERISFGEALERASEAPGIATRSLGAIEKFVSLMSRVREKVEKGEGPSDVLEEILSE
SGYYASLQSSDDPQDESRLENLAELVSVAADFEADLAAAEAAASEFEDEQSGPEAPSGSL
VDQFLEKVSLVADSDQIPEGEDQFVTLMTLHTAKGLEFPIVFLTGMEDGTFPHQRTLADP
KELEEERRLAYVGITRARERLFITRASVRAAWGTPQFFPASRFLEEIPEALVHVARAGNA
RAYADFGGGFGGGFGSSDGWGTSSRRGPSVTGVGVGGGRRDVSRPSFGSGKKAKTASEIP
NLEVGDRVTHDSFGMGTVISASGAGEKLQVEVQFREPHGKKRLLVRYAPITKL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctttttgacgattttccacttcccgaatccttccgcgcgctcggcgaggcc
gggaagggaagtaaaggcgagggtggcacgggtgcgcgcgcgcagagcgggggtgcgcga
ggggagtccgacgcttgcccgcctcccgacgaatgggatttttccgaggatgccccaccc
gaggattgggaaaccgcgtttgacgagcaggtgtcgcaatcgcccaatcccgaggcgggg
gtgagctttgagccggttccggatgagcccgagcccgtgcgtcatgagagttttgcggcc
tggggcgggcgcgatgaggctgctctcgaggagatcgtcgaggggctcaacccgccccag
cgcgatgcggtcgaacatcgcggctccccgctgttgatcgttgccggggcaggctctggc
aagacccgcgtgctgacccgccgcatcgctcaccttttgcgaagtggggaggctcttccg
ggcgaaattctcgcgatcaccttcacgaacaaagccgcctccgaaatgaaggagagggtt
gaggcgctcattgggcccgcggcccggtacatgtgggtgtcgaccttccactcggcgtgc
gtgcgtattttgcggcgagatgcggccgcagccggcctcaagtccacgttctcgatctac
gactcggcagactccaagcggctcatcacgaacatcgcgaaggacatggggctcgactcg
aaaaggcactcgccccgggcgttccaggcaaaaatctcctctctcaagaacgagctcgta
acgcccgaggaatacgctgcccaggcggagaacgcgaagaatcccgccgaacggacgatc
gcgcagatctacacccagtaccaggagcggctgcgcacggcgaacgccgtggacttcgac
gacttgatcgcactgactgtgcgcctgctcgccgagaatccggggattcgcgaaggctat
cgccgtcggttccggcacgtgctcgtggatgagtatcaggacacgaataccgcgcagtac
aggcttgtgcgcgagctcgtcggcgatgaccctcatgcggacctcacggtcgtgggcgac
tcggaccagtcgatctatgcgttccgcggcgcgacgatccgcaacatcatcgagttcgag
caggatttcccgagcgcccgcacgatcgtgctcgagcaaaactaccgctcgacccaaacg
atcctcagcgccgcgaacgcggtcatcaaggaaaaccagggcaggcggcccaagaagctg
tggaccgaccagggcgagggccagcagatcacgctgtatgtggccgacgatgagcagggc
gaggcgcggtacatcacccgccagattgatgctctcatcgatgagggggcgaaggctggc
gacatcgcggtgttctatcgggcgaatgcccagtcccgcgcgcttgaggatcagctcatt
cgcgtgggccttccgtacaaggttgtgggcgggacgcgcttttacgagcggcgagaaatt
aaggacgcgatcgcgtaccttcgggtactgacgaaccccgctgatgaaatcaatctgcga
cgcatcctcaatacgccaaagcgcggaatcggcgagagggccgaggctgccgtgtcagtg
cttgcggagcaagagcggatcagcttcggggaggcgctcgagcgcgcgagcgaagccccc
ggcattgcaacgcgctcgctgggcgcgatcgagaagttcgtatcgctcatgtcgcgcgtg
cgcgaaaaagtcgaaaagggcgagggcccaagcgacgttctcgaagagatcctgagcgag
agcgggtactacgcctccctccaaagcagcgacgatccccaggatgaatcccgcctcgag
aacctcgcggagctcgtgagcgtcgccgctgacttcgaggcggatctcgcggccgccgaa
gccgcggcttccgagttcgaggacgagcagagcggccccgaagccccaagcggctctctc
gtcgatcagttcctcgaaaaggtttcactggtcgccgactccgatcaaatccccgagggc
gaggatcagttcgtgaccctcatgaccctccataccgcgaagggcctcgagttcccgatc
gtgttcctcacggggatggaagacggcaccttcccgcaccagcggaccctcgccgacccg
aaagaactcgaggaggagcgccgtctcgcctacgtggggattacccgagcgcgcgagcgg
ctgttcattacgcgtgcgagcgtgcgcgccgcgtggggcacgccgcagttcttccccgcg
tcccggttccttgaggagatccccgaggccctcgtgcacgtagcgcgcgcaggcaacgcg
cgtgcgtacgccgatttcggcggtggctttggtggcggcttcggcagttccgacggttgg
ggtacctcgagcaggcgtggcccttccgtcaccggcgtaggtgtcggcggcggccgccgc
gacgtatcgaggccgagtttcggttccggcaagaaggcgaaaacagcgagcgaaatcccg
aatctcgaggttggggaccgcgtgacgcacgacagcttcggcatgggaaccgtcatctcc
gcgtccggggcgggggagaagctccaggtcgaggtccagttccgggagccgcacgggaaa
aagcgcctcctggtgcgctacgcgccgatcacgaagctctga
DBGET
integrated database retrieval system
