Dermabacter jinjuensis: COP05_09175
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Entry
COP05_09175 CDS
T06191
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COP05_09175
09124 Replication and repair
03420 Nucleotide excision repair
COP05_09175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
djj03021
]
COP05_09175
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_09175
Enzymes [BR:
djj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COP05_09175
Transcription machinery [BR:
djj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
COP05_09175
DNA repair and recombination proteins [BR:
djj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
COP05_09175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATH97237
LinkDB
All DBs
Position
1996919..1998592
Genome browser
AA seq
557 aa
AA seq
DB search
MSRAGSAGTGALIVQSDKSILLEVAHPAAEEARASIAPFAELEKSPEHVHTYRLTNLGLW
NAKAAGFDAEWVVDALLTHSRFAVPNALLVDVADTMERYGVLSLHNSPAHGLVLLAKDQT
ILTEVLRSKRIAPLVGERIDDTTVTAHPSERGALKQQLLKLGWPVEDLAGFVDGESHPIA
LTDSPSTWQLRPYQREAVEHFTKGGSGVVVLPCGSGKTTVGAGAMAALERTCLVLVTNTV
SARQWRRELLERTSLTEGEIGEYSGAKKEIRPVTIATYQVLTSKRRGIHPHLELVSARDW
GLIIYDEVHLLPAPVFRMTADLQARRRLGLTATLVREDGREGEVFSLIGPKRYDAPWKLI
EAQGWIAPAEMTEVRVTMSSSERKVYASAEPRERQRLAATSPEKVPVVEQLVARHRGEGT
LVIGQYLDQLDELAERLAAPVVTGDTPLKERESLFTQFREGEIDLLVVSKVANFSLDLPE
ASVLIQVSGAFGSRQEEAQRLGRIVRPKRDGRTAHFYTVVTRDTQDQDFAQNRQRFLAEQ
GYGYTILDARELRGGSV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgtctagggcggggagtgcgggcacaggcgctctcatcgtccaatccgataaatcgatc
cttctcgaggttgcccacccggcggcagaagaagcacgcgcgtcgatcgcgccattcgct
gagctcgagaaatcgcccgagcacgtccacacgtatcggctcacgaacctggggttgtgg
aatgcgaaggctgcgggtttcgatgcggaatgggtcgtcgatgccctcctcacgcattcg
cgttttgccgttcccaacgcgctgctcgtggacgtcgccgacacgatggagcgctacggc
gttctgagcctccacaactctcccgcgcacggcctcgtgctcctcgcgaaggatcagacg
atcctgacggaagttctgcgctcaaagcgcatcgcgccgctcgtgggggaacgcatcgat
gacacgacggtgactgctcaccccagtgagcgcggcgcgctcaagcagcagctcctcaaa
ctggggtggcccgtcgaggatctcgcgggtttcgtggacggcgagagccacccgattgca
ctcacggattccccgagcacatggcagcttcgcccatatcagcgcgaggcggttgagcac
ttcacgaagggtggcagcggcgttgtcgtgctcccgtgcggatcgggcaagacgaccgta
ggagcgggcgcgatggcggcgctcgagcgcacgtgcctcgtgctcgtgacgaacacggtt
tccgcccggcaatggcgccgcgagcttctcgagcgcacgtcactcacggagggcgaaatc
ggcgagtacagcggcgccaagaaggagatccgcccggtcacgattgcgacgtaccaggtg
ctcacgtcaaagcgccgcggtattcatccccatctcgaactcgtgagcgcccgcgattgg
ggcctcatcatttacgacgaggttcatctacttccggcccccgtgtttcgtatgaccgcc
gacctccaggcccggcgacggctcggcctcacggcgacgctcgtacgcgaggatggccgc
gagggcgaggtgttctcgctcatcggccccaagcgttacgacgcgccgtggaagctcatc
gaggcgcagggctggatcgccccggcggagatgacggaggtgcgcgtcacgatgtcgagc
tccgagcgcaaggtgtacgcctcggcggagccgagggaacggcagagactcgcggcaacg
agccccgagaaagtccccgtcgtcgagcagctcgttgcgcgacaccgaggtgagggcacg
ctcgtgatcggtcagtatctcgatcagctcgacgagcttgccgaacgcctcgcggctcca
gtcgtcacgggcgacactcctctcaaggagcgcgaatcgctttttacgcagttccgcgaa
ggcgagatcgaccttctcgtcgtctcgaaggtcgcgaacttctcgctcgatcttccagag
gcgagcgtgctcatccaggtgagcggtgctttcggctcccgtcaagaggaggcgcagcgg
ctcggccggatcgtgcggccgaagcgcgatgggcgcacggcgcatttctacacggtcgtg
acgcgcgatacgcaggatcaggactttgcacagaaccggcaaaggttcctcgcggagcag
ggctacggttacacgatccttgacgcgcgagagctcagaggcgggagcgtctag
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