Dermabacter jinjuensis: COP05_10580
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Entry
COP05_10580 CDS
T06191
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
djj
Dermabacter jinjuensis
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_10580
Enzymes [BR:
djj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COP05_10580
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
COP05_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ATH97460
LinkDB
All DBs
Position
complement(2310235..2313831)
Genome browser
AA seq
1198 aa
AA seq
DB search
MTFTVITASAGSGKTYTLTTRLADALAGGVRTSEIIATTFTVKAAAELRERLQVRLLELG
HVEQANEIGSALIGTVNSIAGSIVQDYAIDMGLSPELRVLSEEESELIFTASINHTIAEI
EEREHKLLARLGYEGAPDQGANSFERDESWASAVTSMTRLARTNGITPAALERSAEESIT
AFRSMINEAGYESGPDQRGTWLRAFERCLAELTADRDAARAAEAQGEELTHWPSDGEPAK
RLSTTLGNIEGSIVTLESLYRRMSRGIENVPWTQWMALADVTKVRPAHGGKKPGARPQAV
FAPLADLILGASDGVGVLGNEAFLADVEKLIRLAFSTAAHALEAYAEHKAALGVMDFADQ
ETLALDLVTNNERVRSSLKSRFRFLAVDEFQDTSPIQLELFMRLGDLVKDVVWVGDQKQS
IYGFRDAAPELMSGVVDAVREGRGGFAGGNVEALTDSYRSSEPPLALTNALFTAIFRDMK
PSTVALDVPGARENTRHEGSVELWKGPENLPRAKDAALRSSIATGIHALLTSGATIAGEP
LTPGDIAVLARGGGALATVTDALETLGIPTTGAKRDLWTGREAHMMRAGLASLLDPNDTL
ALAELVSLVPEHASHESWFHELGALPNRAERARRMHTWREDPALAGLEALRARAAQLSPS
EVVLALIDALELPRRVKQWSASEERLAVLDALHSLAREYEEECTGRGRAMGFAGLGAFLA
EHGKEHRLAHNPNAVTVSTIHGAKGLQWPVVVTIVPEKAKNVRDAVTVRPRPASEFDPEH
PLTGRALRFNPIINDSFAPMAKALAHDSDVTRARLANRAEEARIHYVALTRAKYQLVLAG
HKDLTETLYAQFSPEVLEAEIAEAATWTPERDESTKGVKERKEARDQKVAYTLELTEKSD
GCATLTVTGARVPTGLPGQSEPHCAADADDDAQTNECECGPRVSTIPVTVLHHETPGDAD
DPNLPLEPYRRERSPLAAEPTAAPTGAPSSFIEHEGGLPARFAASAVDSTGIDVRVTIHA
KLGAPLVGEGGTHRELVGEAVHAYLATPYSQLPRERQLTLARRITERWLGTNPLLKAKVT
PEVIVEAGERWHTWITREFPGHTVGTEVPVAWWNADGQAMEGWIDSLLTLENGHGIVVDH
KTNSRTEPADVLDFIRREYVGQLATYLNALEERTGRRPDYALVHLPLSGYVVKVEAKA
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaccgtcatcaccgcgtcggcgggatccggcaaaacctacaccctcaccacg
cgactggctgatgccctcgcgggcggtgtgcgcacgagcgaaatcatcgcgacgaccttc
acggtgaaggccgcggccgagctccgcgagcgtctccaagtacgtcttctcgagctcggg
cacgtggagcaggcgaacgagatcggctcggcactcattggcacggtcaactcgatcgcg
ggaagcatcgttcaggactacgcgatcgacatggggcttagccccgagctgcgagtgctg
agcgaagaggaaagcgaactcattttcacggcgtcgatcaaccacaccatcgccgagatc
gaggagcgcgagcacaagcttcttgctcgactcggatacgaaggagcgccagaccaaggc
gcgaactcgtttgaacgcgatgaatcatgggcgagcgccgtcacgagcatgacgaggctc
gctcgcacgaacggcatcacacccgccgccctcgagcgcagtgccgaggagtcaatcacc
gctttccgctcgatgatcaatgaggcaggctacgagagcgggcccgatcaacgcggaacc
tggctgcgagccttcgaacgctgcctcgcagaactcacggcggatcgcgacgcggcacgt
gcggccgaagcccagggcgaggagcttacgcattggccgagcgacggcgagcccgcgaaa
cggctctcgacgacacttggaaacatcgagggctcgatcgtgacgctcgagtcgctctac
cgtcgcatgagccgcggcatcgagaacgtgccgtggacgcagtggatggcgctcgccgac
gtgacgaaagtgcgcccggcccacggaggcaaaaagcccggtgcgcggccccaggcagtc
ttcgcaccgcttgccgaccttatcctcggcgcgagcgacggcgtgggagttctcggcaac
gaagcgttcctcgcggatgtcgagaaactgattcgcctcgcgttctcgactgcggcccac
gcgctcgaagcgtatgccgagcacaaggcagccctgggggtcatggatttcgccgatcaa
gagaccctcgcgctcgatctcgtcacgaacaacgaacgcgtgcgctcctcgctcaagagc
cgctttcgcttcctcgccgttgacgaatttcaggacacgtctccgattcagctcgagctc
ttcatgcgccttggcgaccttgtcaaggacgtcgtgtgggtgggggatcaaaagcagtcg
atctacggctttcgcgacgcggcccccgagctcatgtcgggcgtcgtcgacgccgtgcgc
gagggccgaggagggttcgccggcggaaacgtcgaggcgcttaccgattcctatcgaagc
tctgagccgccgctcgccctcaccaatgctctgttcacggcaatctttcgagacatgaag
ccgtcgactgtcgcgcttgacgtgcccggtgcccgcgagaacacgcggcacgagggcagc
gtggagctgtggaaaggccccgagaacctgccacgcgcgaaggacgcagcattgcgaagc
tcgatcgcgacgggtatccacgcgctccttacctcgggtgccacaatcgccggagagccc
ctgacgcccggtgatattgccgtgctcgcgagaggcgggggagcgcttgccaccgtgacg
gacgcgcttgaaaccctcggcatacctacgactggcgcgaagcgtgatctatggaccggg
cgcgaggcgcacatgatgcgtgccggcctcgcgtccctcctcgacccgaacgacacgctc
gcactcgccgagctggtgagcctcgtgccggagcacgcgtcgcacgaaagctggttccac
gagcttggcgcactccccaatcgtgccgagcgtgcgcggcgcatgcacacctggcgtgaa
gatcccgcacttgcgggtctcgaagctttgcgtgcgcgcgccgctcaactcagtccgagc
gaagtcgtccttgccctcatcgatgcgctcgagcttccccggcgcgtcaagcagtggagt
gcgagcgaggagcgactcgcagttctcgatgcccttcactcacttgcccgcgaatacgag
gaggagtgcacgggcaggggccgcgccatgggctttgccggcctcggggccttccttgcg
gagcacggcaaggagcacaggcttgcgcacaacccgaacgccgtcaccgtcagcaccatc
cacggtgcaaagggcctgcagtggcccgtggtcgtcacgatcgttcccgagaaagcgaaa
aatgttcgagacgcggtcacggtgcggccgaggccagcgtcggaattcgatcccgaacac
ccccttaccggtcgagcgctgcgcttcaacccgatcatcaacgactctttcgcgcccatg
gcaaaggcgctcgcacacgatagcgatgtgacgcgcgcgcgtctcgccaaccgcgcggag
gaggcccgcatccactacgttgcgctcacgcgagcgaaatatcagctcgttcttgcaggt
cacaaagaccttaccgagacgctgtacgcgcagttttcccccgaggttctcgaggcggaa
atcgccgaagcagccacgtggacgcccgagcgggacgaatccacgaagggcgtgaaagaa
cgcaaggaggctcgggatcagaaagtcgcgtatacgctcgagctcacggagaaatccgac
ggctgcgcaaccctcaccgtgaccggggcgcgcgtcccgaccggcctgccgggccagagc
gagcctcactgcgccgccgatgctgacgacgacgcccagacgaacgagtgtgagtgcggt
cctcgcgtctcaacgatccccgtgacggttctccaccacgagactccaggcgacgccgat
gaccccaatttgcctctcgagccgtaccgcagggagcgaagcccactcgcggcggaaccc
acggcggctcccacgggggcgccgtccagtttcatcgagcacgagggcggccttcccgcg
cgttttgccgcgagcgccgttgattccaccggcatcgatgtgcgagtcacgattcacgcg
aagctcggtgcccctctcgtcggggagggcggcacgcatcgagaactcgtaggcgaagcc
gtccacgcctaccttgcgaccccgtactcgcagctaccgcgcgagcgccagctcaccctt
gcccggaggatcaccgagcgatggctcggcacaaatcctctgctcaaagcgaaggttacg
cccgaggtcatcgtcgaggccggcgagcgatggcacacctggatcacgcgcgagttcccg
gggcacaccgtcggcactgaagttccggtggcgtggtggaatgccgacggtcaagccatg
gaaggctggatcgactcgctcctgaccctcgagaacggtcacggcatcgtcgtggatcac
aaaacgaattcgcgaaccgaaccagccgacgtcctcgatttcattcgccgcgaatacgtg
ggccagctcgcgacctacctgaatgccctcgaggagcgcacggggcgccgccccgattac
gccctcgtgcatctcccactcagcgggtacgtcgtgaaagtcgaggccaaggcctag
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