KEGG   Desulfurococcus amylolyticus 1221n: DKAM_0151
Entry
DKAM_0151         CDS       T00817                                 
Name
(GenBank) Putative ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dka  Desulfurococcus amylolyticus 1221n
Brite
KEGG Orthology (KO) [BR:dka00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dka03400]
    DKAM_0151
Enzymes [BR:dka01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DKAM_0151
    5.6.2.6  RNA 3'-5' helicase
     DKAM_0151
DNA repair and recombination proteins [BR:dka03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DKAM_0151
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ACL10480
UniProt: B8D2T3
LinkDB
Position
complement(136992..139652)
AA seq 886 aa
MGETTISVFNGDFTVAEAMDGLRPYVKEWFTRKYREPTPVQRKTIPLVKEGFNILVSSPT
GTGKTLAVFLGIIDNIYKQYEETGKMPEGIYVVYVSPLRALNNDMRKNLLEPIEGIVNEA
RRMGLELPPIKIAVRTSDTTQSEKQRMNRDPPHILITTPESLAISLNAPKFREKLANTRI
LVVDEIHELASSKRGSHLAVSIERLENLAGRPLQRIGLSATISPLEEVALFLAGYNDEGE
PRDCIIVDARFDKKMDIRVVSPIRDLARASAEEINESIYGELKKIISRHRTTLVFTNTRS
ATERVVFKLRKIFEKGGVIDIDDIEAHHSSLSRDTRIEIENKLKNGELRAIVSSTSLELG
IDIGYIDIVVLLSSPKSVTRLLQRIGRAGHHIREVSKGRIIVVDRDDLLECTVLSKLALE
RKIDRIRIPRNPLDVLAQHIVGMALERKWRIDEAYSLVKRTYTFHDLSYDDFLSTLRYLA
GQLGDFYEYQRVYSKIWLDEEEGIFGRKKSTRMIYYQNIGVIPDESKVHVFTVDNKYVGD
LEEGFVEYLSQGDLFVLGGRVYEYLYSRGLKVVVKPADGQRPTVPSWFSEMLPLSYDSAR
EVGCFRRVIAEMLDEKDREEVVEYLVKEYKLQKHAAETICDYIMDQKLYTKGLVPSDKLI
LIEIYDEPTRRNIIVHSIFGRKANDALARLYAYTVGQRLGVNIRLTVTDNGFMLTIPGHP
QGKWVEWFKSIPPDQAWDMLERIIRRTDLLKRRFRHTAVRSFMLLRKYRDTEKSVNRLQV
NAEELLKAVEEMQGFPVLKETYREILMDYMHIDEAIEVLSMVRNGEIEVALLGPLDVPSP
FAHSIVVHGYSDVVLMEDMRRMLIRLHELVKERLSSSNMDTWNTIN
NT seq 2661 nt   +upstreamnt  +downstreamnt
gtgggggaaacgactataagcgtatttaatggggatttcacagttgcagaggccatggat
ggattaagaccatatgtaaaggaatggttcaccaggaaatacagggaaccgacgcccgtt
cagaggaagaccatacccctcgttaaagaagggtttaacatactggtttcaagccctact
ggaaccggtaagaccctggcagtcttcctcgggataatagataatatctacaagcaatat
gaggaaacaggtaagatgcccgaaggtatttacgtggtatatgtgagcccgcttagagca
cttaacaacgacatgaggaagaacctgttggaaccaattgaaggcattgttaacgaggca
aggcgcatgggactggaactcccccctataaagatagctgttagaaccagcgataccact
cagagcgagaagcaacgcatgaacagggatcccccgcacatattgataacgacccctgag
agccttgcaatatcgttgaatgcccctaagtttagggagaagctagctaacactaggata
ctcgtggtcgacgaaatacatgaactagcctcaagtaagagggggagtcatctagctgta
agtatagagagacttgagaacctagccggaaggcccctccaaagaattgggttaagcgca
acgatatctcctcttgaagaagttgcattattcctagccggttacaatgatgaaggagag
ccccgggactgcattatagttgatgctagattcgataagaagatggatataagggttgtt
tccccaatcagggatttagcgcgagcatccgccgaggaaatcaatgagtcaatatatgga
gagctgaagaagataatatcaaggcaccgtacaacactagtattcaccaatactaggagc
gctaccgagagagtggtattcaagctcaggaagatctttgagaaggggggagtaatagat
atagatgatatagaggcacaccatagtagtctaagcagggataccaggattgagatagag
aataagcttaagaacggggaattaagagccatagtgagctcgacatcactggagctcggg
atagacataggctacatcgatatcgtggtcttgcttagctcccctaagagcgttacaagg
cttctacagagaattgggagggctggacaccatatcagggaggttagtaagggtaggata
attgtagtagaccgcgatgacctacttgagtgcactgtactatctaaactagccctcgag
aggaagatagataggatcaggataccgcgtaatccacttgacgtcctcgcccaacacatc
gttggaatggcgttagagcggaaatggaggatcgatgaagcctatagtcttgtgaagaga
acatatacattccatgatctaagctacgatgacttcctctcgacgctgagatacttggct
ggacaactgggagatttctacgagtatcaaagagtctactccaagatatggctggatgaa
gaagaaggcatattcggcaggaagaaatccacacgaatgatatactatcaaaacataggg
gttataccagatgaaagtaaagtacacgtgttcacggtggataataagtacgttggagac
ctcgaggagggattcgtagagtacttatcacagggagacttattcgtgctaggtggtaga
gtatatgagtacctatatagcaggggtctcaaggtcgtggttaagccggcggatggacaa
agacccacggttccctcctggttcagcgagatgctgcccctctcctatgactcagccagg
gaggttggatgctttagacgtgtaatcgctgaaatgcttgatgagaaggaccgtgaagaa
gtggttgagtaccttgtaaaggagtataagctgcaaaaacatgcggccgagactatttgc
gactacataatggatcaaaagctctatacaaagggactcgtgccttcagataaattgata
cttatagaaatatatgatgagccaacacggagaaatataatcgtacactcgatctttgga
cgaaaagcaaacgacgctcttgccaggctatatgcttacaccgtggggcagagactaggg
gtgaatatcaggttaacggtaaccgataacggcttcatgcttacgatccccggtcatccg
caaggcaaatgggttgagtggtttaaatcaataccaccggatcaagcgtgggacatgctg
gagagaattattagaagaacagatctactcaaacggaggttcaggcatactgctgtcagg
agctttatgctattgagaaaatacagggatacggagaaaagcgttaacaggctacaggtt
aatgctgaggaattactgaaggccgtcgaagagatgcagggatttccggttctcaaggag
acttatagggagatcttaatggattacatgcatatagatgaagcgatagaggtccttagt
atggtcagaaacggggagatagaggtggcactactaggaccacttgatgtaccaagtccc
ttcgcgcatagcatagtcgtgcatggatacagtgacgtggtgttaatggaggatatgcgt
agaatgcttataagactccacgagctcgttaaggagaggttatccagttctaacatggat
acgtggaataccattaattaa

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