Desulfurococcus amylolyticus 1221n: DKAM_0300
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Entry
DKAM_0300 CDS
T00817
Name
(GenBank) Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dka
Desulfurococcus amylolyticus 1221n
Pathway
dka00260
Glycine, serine and threonine metabolism
dka00460
Cyanoamino acid metabolism
dka00630
Glyoxylate and dicarboxylate metabolism
dka00670
One carbon pool by folate
dka00680
Methane metabolism
dka01100
Metabolic pathways
dka01110
Biosynthesis of secondary metabolites
dka01120
Microbial metabolism in diverse environments
dka01200
Carbon metabolism
dka01230
Biosynthesis of amino acids
dka01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dka00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DKAM_0300
09102 Energy metabolism
00680 Methane metabolism
DKAM_0300
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DKAM_0300
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DKAM_0300
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DKAM_0300
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DKAM_0300
Enzymes [BR:
dka01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DKAM_0300
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
XTBD
Motif
Other DBs
NCBI-ProteinID:
ACL10626
UniProt:
B8D3E5
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All DBs
Position
279917..281263
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AA seq
448 aa
AA seq
DB search
MVYESGEALGIDALREMYPDLNQVLSITINHTVWRKRQTINMIASENVMSPLAMLVYLND
MMHRYAEGKPYKRFYQGLIYVDELEVKAQELMGDLLGTKYVDLRPISGTTANATAFRTFT
KPGDKAVVAPVQAGAHVSHTRYGTLGALGIEQIEMPFDIEEWNIDVDKARKLIEEVKPKI
VTLGGSLYIFPHPTKEIAEAAHSVGAKVIHDVAHVLGLIVGGVWENPLKLGADVITSSTH
KTFPGPQGGVFATSNEEDYKEMGKVVFPMFVSNHHLHRLAAMAVTAIEMKLWGSEYARQV
VRNAKALAEALASEGFKVVMESKGYTTSHQVVVDVAELGRGTKVAKLLEDAHIIVNKNML
PWDRPEDVKDPSGLRLGTQELTRWGMKEGEMKEIARLMKMVVIDKRSPAEVKEKVMEFKK
EFMEIHYGFKLTREDEVKLLKIMLHAET
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggtatatgaatcgggtgaagccctaggcatagatgctcttagagaaatgtatccagac
ctcaaccaggtattaagcatcaccataaaccacacggtatggaggaagcggcaaacaata
aacatgattgcaagcgagaatgttatgtcaccccttgcaatgctcgtgtacctgaacgac
atgatgcataggtatgcagaagggaagccgtataagaggttctaccaggggctcatatac
gttgatgagttagaggttaaagcccaggagttaatgggtgatctcctaggcactaaatac
gtggatttaagacctataagcggtacgacagcgaatgcgacggcctttagaacattcacg
aagccaggtgataaagcagtagttgcccctgttcaagccggtgcacacgtaagtcacacc
aggtatgggacccttggggcgctgggcatagagcagattgagatgccgttcgacatagaa
gagtggaatatagatgttgataaagccaggaagctcatcgaagaagttaagccgaagata
gtgactctgggcggctcactctacatattcccgcatccaaccaaggagatcgctgaggca
gcgcacagtgtgggggctaaggtaatacatgatgtggcacatgtcttgggcttaatagtt
ggaggcgtatgggagaacccgttgaagcttggggcagatgtaatcacctcgtcaacgcat
aagacattcccaggtccacaaggcggagtattcgctacctcaaacgaggaggactataag
gaaatgggtaaagtcgtcttcccaatgttcgtctccaaccaccatctccatagattagct
gcaatggctgttacagcaatagagatgaagctctggggctccgagtacgctaggcaggtg
gttagaaatgctaaagcactagcggaggcccttgcaagcgagggcttcaaggttgtgatg
gagagcaagggttataccacgagccaccaggtggtagtagacgttgcagagctcggcaga
ggcaccaaggtagctaagctactagaggacgcccacatcatagtcaacaagaacatgcta
ccatgggataggccggaggatgtcaaagatccaagcgggctgagacttggaacccaggag
ttaaccaggtggggtatgaaggagggcgagatgaaggagatagctaggctcatgaagatg
gttgtgatagataagaggagcccagctgaagtgaaggagaaagtcatggagttcaagaag
gagttcatggagatacactacggcttcaagctgacgagggaggatgaggtaaaactatta
aagataatgcttcacgcggaaacttaa
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