Desulfurococcus amylolyticus 1221n: DKAM_0610
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Entry
DKAM_0610 CDS
T00817
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dka
Desulfurococcus amylolyticus 1221n
Brite
KEGG Orthology (KO) [BR:
dka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dka03400
]
DKAM_0610
DNA repair and recombination proteins [BR:
dka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKAM_0610
Archaeal homologous recombinant proteins
DKAM_0610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
AAA_21
AAA_29
Mce4_CUP1
Baculo_PEP_C
Laminin_II
Rad50_zn_hook
PspA_IM30
DUF1664
DUF4200
SbcC_Walker_B
DUF3450
AAA_16
ABC_tran
AAA_25
NACHT
nSTAND3
AAA_13
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACL10936
UniProt:
B8D4A5
LinkDB
All DBs
Position
complement(573882..576338)
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AA seq
818 aa
AA seq
DB search
MRIYGLMLENIRSFKNEYIVFPKKGVTVIHGETGSGKTSILMSISAALFGLQKEGKDPFR
AFAYPTGKDLLRADALRGRIRLLFEHEGRVYLVEREFKRSSNSVVNVDRNRLEEYIIKED
KLIKVNSLILGTEELNKRIREILGIKERAREKPLLFTSVLYAPQFNIHEILSLDSEERGE
IIERSLGLYKYKEYKNNSNAVRDVIKDKIDELTDKIDGLKKKLKDKNKEKLLEEKQRLEK
QLKELEKILVEKQKERDELDKRIKEHQNRLRDMERRIGELQSRIGQARKQEARLKDVRNE
LAKIALNLGKNASTGYTELLEELRRREREIEGKVRELQDIESELVDKRKEIEEELNEAKR
KREDIMMRLGRLEADEENLTRQEQELNKQLEKYRDLLNKGICPLCLQPIPHEHGIKLIDE
VQGRLEEVGKKIRELKEEETSRYKELEDINKRINALEENREEVEEKLDKVRRDSTRLLQE
LLSLKHTAEKINSLVDEASRIEKEISEARSLEEELARINSEKENTISIIHELEDKYREAK
EKLEGLIAEKAGTEKSIKYIELEIQDIEKEEDELRQLEDEKKFHEWMDTTMNILDKLVDE
VEKRVSLEMVSEFRRIFYMILDTLLQGQPVEVGIRDDFTIEPKIRIGGRIYTISSLSGGQ
NIAISLAYRLALNATVRTYSPFLRKTVLILDEPTTGFSQELVKRLSEVLRKIGDLEGQVI
VVTHDELLKEIGDCKIMLERDPINHVSKVREQECDIEEFNKFKNLVEGLLRGSLQVDTVK
MEKIEVEPAGFKPEVRLGAGTVQQAKRKSLFDFHDKPK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttatggattaatgcttgaaaatatacggagctttaagaacgagtacatagtg
ttccctaagaaaggggtaaccgttatacatggcgagacaggaagtggtaaaacaagcata
ctcatgtctataagtgcagcattatttgggctccaaaaagagggcaaggatccatttagg
gcatttgcatatccaacaggtaaagacctattgagggctgatgcattaaggggtaggata
cgactcttattcgagcatgaaggcagggtataccttgttgaaagagaattcaagagaagt
agtaacagcgtggttaatgttgaccggaataggcttgaagaatacatcataaaggaggat
aagttgatcaaagtaaacagcctgattctcggaacagaagaattgaacaagagaatccgg
gagatcctcgggataaaagagagggctagggagaaaccactcctattcacaagcgtgctc
tatgccccccaattcaacatacatgaaattctcagtctagatagcgaggagagaggcgag
atcatagagagatccctgggactatacaagtacaaggagtacaagaataatagcaatgca
gtaagagacgtgattaaggataaaatagatgaattaaccgataaaatcgatgggctgaag
aaaaagcttaaagacaaaaacaaggagaaactactcgaagagaagcagagattagaaaag
cagttaaaagagcttgaaaaaatactcgtggagaagcaaaaagagcgtgatgagctagat
aaaagaataaaggagcaccagaatcgccttagggatatggagcgaagaataggcgagtta
cagagcaggatagggcaagctaggaaacaagaggctaggctgaaagatgtgagaaacgaa
ctagctaaaatagcgcttaatctaggcaagaatgcttcgactggttatacagagttacta
gaagaattaaggagaagagaaagagaaatagaggggaaagtaagggagctacaagacata
gaatctgagctagtagataagcgtaaggaaattgaggaagaattaaacgaggctaagaga
aaaagggaagatataatgatgaggcttgggagacttgaagccgacgaggaaaaccttaca
agacaagaacaagagttaaataagcaactcgaaaaatacagggatctcttaaacaagggg
atatgccccctatgcctccagccgataccacatgaacacggcattaaactaattgatgaa
gtccaaggaagattagaggaagtagggaaaaagataagggagctgaaggaagaagaaact
agtcgctataaggaattagaggatatcaataagaggatcaatgctctcgaggaaaaccgg
gaggaagtagaggaaaaactggacaaagtgagaagagattcgacaagacttttacaggaa
ttactaagtcttaagcacactgctgaaaagataaatagcctggtagatgaggcttcaaga
atagaaaaggagatctccgaggctagaagcctggaagaagaattagccagaatcaatagt
gagaaagaaaacactataagcatcatacatgaactcgaagacaagtaccgtgaagccaag
gaaaaactggagggattaattgctgaaaaagctgggactgagaaatcaattaagtacatt
gaattagagatacaagacattgagaaagaagaggatgaactgagacaactcgaggatgag
aagaaattccatgaatggatggacacgacgatgaatatactagataaattagtcgacgag
gttgaaaaaagagtctcactagagatggtctcggaattccgaaggatcttctatatgata
ctagatacattattacaggggcaaccagtggaagtaggcataagagacgacttcacaata
gagccgaaaataaggataggtggtagaatctacactatatcatcactcagcggtgggcaa
aacatagccatcagcctagcatacaggctcgccttaaacgctacagtaagaacatactcg
ccattcctgaggaaaaccgtcctgatactagatgagccaacaacaggcttcagccaggag
cttgttaaaaggcttagtgaggtactacgtaaaataggggatctagaaggacaagtaata
gtcgtaacacatgatgaattattgaaagaaataggagattgcaagataatgctagaacgt
gatcccataaaccatgtctctaaggtacgggaacaggagtgtgatatagaggagttcaat
aaattcaagaatctggtcgaaggcctcttacgtggctcactacaggtagataccgtgaaa
atggaaaagatagaggtggagccagcaggcttcaagccggaagtgaggttaggagctgga
actgttcagcaagccaagagaaaaagcttgtttgacttccatgataaacctaagtag
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