KEGG   Desulfurococcus amylolyticus 1221n: DKAM_0689
Entry
DKAM_0689         CDS       T00817                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
dka  Desulfurococcus amylolyticus 1221n
Pathway
dka03030  DNA replication
Brite
KEGG Orthology (KO) [BR:dka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DKAM_0689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dka03032]
    DKAM_0689
DNA replication proteins [BR:dka03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     DKAM_0689
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid RuvB_N Rad17 AAA_14 AAA_assoc_2 AAA_22 AAA_5 AAA_2 nSTAND3 AAA_3 DNAX_ATPase_lid Mg_chelatase AAA_18 AAA_16 ResIII PhoH DNA_pol3_gamma3 AAA_33 IstB_IS21 AAA_7 AAA_11 AAA_24 bpMoxR FtsK_SpoIIIE AAA_28 ATPase_2 TIP49 DUF815 Cdc6_lid NTPase_1 TniB AAA_23 ABC_tran NB-ARC Zeta_toxin SRPRB UBA_Rad5 NPHP3_N AAA_19 APS_kinase RNA_helicase AAA_30 CbiA AAA_25 Torsin NACHT GTP_EFTU KTI12 SLFN-g3_helicase Viral_helicase1
Other DBs
NCBI-ProteinID: ACL11015
UniProt: B8D4I4
LinkDB
Position
659483..660463
AA seq 326 aa
MSEEVELLWAEKYRPRTLDEVVNQKEVVVRLKKFVEEKNIPHMLFAGPPGTGKTTIAHCL
AHDLYGDDYRKYMLELNASDERKIEVIRGKVKEFARTRVVGDVPFKIVLLDEADNMTADA
QQALRRLMELYSATTRFILTANYPSKIIEPIQSRTAIFRFSPLSREDVVGRLKYICNAEK
IECAEKALETIYELSEGDMRRAINILQTAAALGEVVEEAVYKVLGMAHPREVREMINTAL
AGNFTEARNKLRTLMIEYGLSGLDIVKQIHREIFSQDVKIPDEIRVLIADLAGEIQFRLV
EGADDEIQLNAFLARLALIGKKFKTG
NT seq 981 nt   +upstreamnt  +downstreamnt
ttgagtgaggaagtagaattattgtgggctgagaaatatcgtcctagaacactcgacgag
gtagtgaatcagaaggaagtagtcgtcaggctgaagaagttcgttgaggagaagaacata
ccccacatgctcttcgctggacctcctggcacaggtaagaccaccatagctcattgccta
gcccatgatctctacggcgacgactataggaagtatatgctggagttaaacgcgtcggat
gagaggaagatagaggttataagaggcaaggttaaggagttcgcaaggactagagtcgtc
ggtgatgtaccatttaaaatagtgcttctcgacgaagccgataacatgacggctgatgct
cagcaagccctgaggaggctcatggagctgtatagtgctacaacaaggtttattctgacg
gcaaactacccaagcaagatcatagagcctattcaaagtagaacagccatcttcaggttt
tcgccgctaagcagggaggatgttgtagggaggttgaaatatatatgcaacgctgagaag
atagaatgcgctgagaaagcgcttgaaacaatatatgaactatcagagggtgatatgagg
cgggccataaacatcctgcagacagcggccgccttaggcgaggtagtcgaggaagccgtc
tacaaggtactagggatggcgcatcccagggaagtcagagagatgataaatacagcacta
gcaggcaacttcacggaagccaggaataagttaagaaccttgatgatcgaatacgggctc
agcggcctcgacattgtgaagcagatacatagagagatattcagtcaggatgttaaaata
ccggatgagataagggtgttaatagctgatctagctggtgaaatacagttcaggcttgtc
gagggagccgatgacgagatacagttgaacgcgtttctagccaggctagctttaataggt
aagaaattcaagacggggtag

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