KEGG   Desulfurococcus amylolyticus 1221n: DKAM_1068
Entry
DKAM_1068         CDS       T00817                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
dka  Desulfurococcus amylolyticus 1221n
Pathway
dka03030  DNA replication
dka03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DKAM_1068
   03410 Base excision repair
    DKAM_1068
   03450 Non-homologous end-joining
    DKAM_1068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dka03032]
    DKAM_1068
   03400 DNA repair and recombination proteins [BR:dka03400]
    DKAM_1068
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dka04147]
    DKAM_1068
DNA replication proteins [BR:dka03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DKAM_1068
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DKAM_1068
DNA repair and recombination proteins [BR:dka03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DKAM_1068
Exosome [BR:dka04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DKAM_1068
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N HHH_5
Other DBs
NCBI-ProteinID: ACL11394
UniProt: B8D5L3
LinkDB
Position
complement(1012615..1013706)
AA seq 363 aa
MYIDQHNGVDMGVDLKDIIPGEAKTVIEDLRILHGKIIVIDGYNALYQFLAAIRQPDGTP
LMDNNGRITSHLSGLFYRTINIVEAGIKPVYVFDGKPPELKAREIERRKAVKEEAAKKYE
EAVQSGDLELARRYAMMSAKLTEEMVRDAKSLLDAMGIPWVQAPAEGEAQAAYIVKKGDA
YASASQDYDSLLFGSPKLVRNLTISGRRKLPRKNEYVEVKPELIELDKLLVQLGITLENL
IDIGILLGTDYNPDGFEGIGPKKALQLVKAYGGIEKIPKPILKSPIEVDVIAIKKYFLQP
QVTDNYRIEWHTPDPDAVKRILVDEHDFSIDRVSTALERYVKAFKENIRGEQKGLSKWFS
KPK
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtatattgatcagcataatggtgtagatatgggagtagacttaaaagacattatacca
ggcgaagctaaaacggttatcgaggatctcaggatcctacatggcaagattatagtgata
gatggctataacgcattataccagttcctagctgcaatcagacaaccggatgggacccct
ctaatggataacaacgggaggatcacgagtcatttaagcggtttattctatagaaccata
aatatcgttgaggcagggataaaaccagtctacgtgtttgatggtaaaccccctgaattg
aaggcgagggagatagagaggaggaaagccgttaaggaggaggcagcaaagaagtacgag
gaagccgttcaatccggagacctcgagctcgcgaggagatacgcaatgatgtcggccaag
ctgacagaggaaatggtgagggatgctaaatcattactagacgcaatgggtattccatgg
gttcaagcaccagcggagggcgaggctcaggcagcctatattgttaagaagggggatgcc
tatgcatccgcctcacaggattacgatagcttgctattcggctcccctaagctcgttaga
aacctgaccataagcggtaggagaaagctaccgagaaaaaacgagtatgttgaagtaaag
ccggagctcatagagctcgacaaactccttgttcagctaggtataacccttgagaacctc
atcgatataggtatactcctggggacagattacaatccagacggcttcgaaggcataggc
cccaagaaggctcttcaactagttaaggcatacgggggaatcgagaagataccgaaaccc
attttgaagtcgccgatagaagtagatgttatagcaataaagaaatacttccttcaacca
caggtaacagacaactacaggattgaatggcatacccccgatcccgatgcagtgaaaaga
atattggtggatgaacatgatttcagtatagatagagttagcacagcgcttgagagatac
gtgaaggcctttaaagaaaatatacggggagaacagaaaggtctctctaaatggttcagt
aagccgaagtag

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