Desulfurococcus amylolyticus 1221n: DKAM_1147
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Entry
DKAM_1147 CDS
T00817
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dka
Desulfurococcus amylolyticus 1221n
Brite
KEGG Orthology (KO) [BR:
dka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dka03016
]
DKAM_1147
Enzymes [BR:
dka01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DKAM_1147
Transfer RNA biogenesis [BR:
dka03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DKAM_1147
Prokaryotic type
DKAM_1147
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ACL11473
UniProt:
B8D5U2
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All DBs
Position
complement(join(1078001..1078778,1078800..1079059))
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AA seq
345 aa
AA seq
DB search
MDLVEKGLSFIDYITARAGYRNEWIVLRDAETSPDHGVLPYERKVNDHINYGVINLDKPP
GPTSHEVVAWVKKMFNLEKAGHGGTLDPKVTGVLPIGLANSTKVIGNVIHSVKEYVMVIQ
LHGDARESSVKMVVEYFKGDIYQKPPLRSSVKRSIRVRRIYEIELLEIRDRFILVRVLSD
PGTYMRKLAHDIGLMLGTGAHMRELRRTRTGPYREDETLVRLQDISEALALWRSSGDERY
IRRIILPVETSIAHLPKIMILDTAVDAIAHGANLAVPGIARLTSNVERNKTVAILTLKGE
LVALGTALYSAKEIAGMKKGVVARTRRVVMPTGIYPPAWRKGQPG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggacctggttgagaaggggttatccttcatagattacataacagcgagagccggctac
aggaatgaatggatagtactaagagatgctgagacaagcccagaccacggggtattacca
tatgagagaaaggtaaacgatcacataaactacggcgtgataaaccttgataaaccaccg
gggccaacgagtcacgaggtcgtggcatgggtcaagaaaatgttcaatctggagaaagcc
ggtcacgggggcaccctggaccccaaggtgaccggtgttctaccaatcgggctagcgaat
agtacgaaggtcattgggaacgtgatacatagtgttaaggaatacgtaatggttatacag
ttacatggggatgccagggagtccagtgttaaaatggttgtagagtactttaagggcgat
atataccagaagccgccgctgagatccagtgttaagagaagtattagggtcaggaggata
tatgaaatcgagttactggagatcagggatagattcatacttgtgagggttttaagcgat
ccaggtacatacatgaggaaacttgcacacgatattggattaatgcttggcaccggggca
cacatgagggagctacgtagaacccgtacaggtccttatagagaggatgaaacactggtt
aggctgcaggatatcagcgaggcacttgcattatggaggagtagcggggatgagagatac
atcaggaggataatactcccggttgagacatcgatagctcacctaccgaagataatgata
cttgatacagctgtagacgcaatagctcatggagccaatctagctgtaccaggcatcgcg
aggttaacaagtaatgttgagagaaataaaactgtagctatcctaacgcttaaaggcgag
ctggtggcgctgggtacggcgctatatagtgcaaaggagatagctgggatgaagaagggt
gtggtggcgaggacccggagggtggtaatgcctacagggatctatccccccgcatggagg
aaggggcagccgggatga
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