Desulfurococcus amylolyticus 1221n: DKAM_1212
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Entry
DKAM_1212 CDS
T00817
Name
(GenBank) tRNA intron endonuclease, catalytic-like protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
dka
Desulfurococcus amylolyticus 1221n
Brite
KEGG Orthology (KO) [BR:
dka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dka03016
]
DKAM_1212
Enzymes [BR:
dka01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DKAM_1212
Transfer RNA biogenesis [BR:
dka03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
DKAM_1212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
ACL11538
UniProt:
B8D607
LinkDB
All DBs
Position
complement(1134087..1134623)
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AA seq
178 aa
AA seq
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MFKLSKVDGFEVVFNDEACTASTSDQRVVNMLEERWIGKKRGRELILELVEVAYLILEGR
ATVKTTDGKYIRSLNELMQHEYKCFKDFFWPQLLVYKDLRDRGRRVRVVDQERFLIKDKS
GDLRLVLVLEEKKMRGITDIMREVENARSNSLQLVLAIVSLQGDITYYEANKIALEVV
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaagttgagtaaagtggatggcttcgaagtagtctttaatgatgaggcgtgtacg
gcgtcgacgagcgatcaaagagtagtcaatatgcttgaggagagatggatcggtaagaaa
cggggcagggagctcatcctggagctcgtcgaggtcgcttacttaatcctagagggaaga
gccactgtgaagactacggatggcaagtatattcgaagccttaacgagctcatgcaacat
gaatacaagtgctttaaggacttcttctggccccagttactcgtctacaaggatttaagg
gatagaggtaggagggtaagggtagtagaccaggagaggttcctcattaaagataagtca
ggtgatttaaggctggtactggttctcgaggagaagaagatgaggggtataacggatata
atgagggaggtggagaacgctagaagcaatagtcttcaactagttctagcaatagttagc
ctccagggggatataacatactatgaggcaaacaagatagcgttggaggtggtttaa
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