KEGG   Desulfurococcus amylolyticus 1221n: DKAM_1419
Entry
DKAM_1419         CDS       T00817                                 
Name
(GenBank) DNA polymerase sliding clamp subunit B2 (PCNA - like protein)
  KO
K04802  proliferating cell nuclear antigen
Organism
dka  Desulfurococcus amylolyticus 1221n
Pathway
dka03030  DNA replication
dka03410  Base excision repair
dka03420  Nucleotide excision repair
dka03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DKAM_1419
   03410 Base excision repair
    DKAM_1419
   03420 Nucleotide excision repair
    DKAM_1419
   03430 Mismatch repair
    DKAM_1419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dka03032]
    DKAM_1419
   03400 DNA repair and recombination proteins [BR:dka03400]
    DKAM_1419
DNA replication proteins [BR:dka03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DKAM_1419
DNA repair and recombination proteins [BR:dka03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DKAM_1419
   MMR (mismatch excision repair)
    Other MMR factors
     DKAM_1419
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    DKAM_1419
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 DUF1071
Other DBs
NCBI-ProteinID: ACL11745
UniProt: B8D6L4
LinkDB
Position
1316942..1317691
AA seq 249 aa
MRLKFSDAVAWRYAITSISKIIDEANFRISGEDGLLLKAMDPSTVVLVEFAIPKEAFSEY
SVERELVVGVRMDDLTKVLKRARRGDELVLEVLEDGRLSVVFEGRGVRRFTLPSIEMTYE
EIPEISFEVGFKGKLLPKLFRDIVREVEPISDSIEFSASKDSDKLTVSSRSEIAEAEIEL
SASDGALIEYQVLSDARAKYTIDYLIDISVASQAAELMEIEFGNGTPLKLTYEIPGGGRL
VFYVAPRED
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaggcttaagtttagtgacgcagttgcatggagatatgctataacatccatctctaag
attattgatgaagcaaactttaggattagcggtgaagacggattattattgaaagctatg
gatcccagtactgttgtacttgtagagttcgcaataccgaaggaggctttttcagagtac
agtgtggaaagggaacttgtagtaggggtaagaatggatgatctgaccaaggtgttgaag
agggctaggagaggtgatgaactcgttttagaagtgctagaagacggcaggctaagcgta
gtcttcgagggtaggggtgtcagaagatttaccctgccaagcatagagatgacttacgag
gagataccggagattagtttcgaagtagggtttaaggggaagcttcttcccaagttgttt
agagacatagttagggaggtagagcccatcagcgattccatcgagttttcagccagcaag
gacagcgataagctgactgtctcatcgaggagtgaaatagctgaggctgaaatagagctc
tcagcctcagatggtgcgttaatcgagtaccaggtgctaagtgatgcaagggctaaatac
acgatcgactatcttatcgatatatcggttgcttctcaggctgctgaattaatggagata
gaattcggtaatggaacaccgctcaagcttacatacgagatacccggcggaggaagacta
gtgttttatgttgccccacgggaagactag

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