Dietzia kunjamensis: NHB83_00805
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Entry
NHB83_00805 CDS
T08346
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dkn
Dietzia kunjamensis
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dkn03016
]
NHB83_00805 (thpR)
Enzymes [BR:
dkn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NHB83_00805 (thpR)
Transfer RNA biogenesis [BR:
dkn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NHB83_00805 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
USX46088
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All DBs
Position
162494..163084
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AA seq
196 aa
AA seq
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MGHRMFVAVAPPDEVREELERFLEPRPGLAWTNPAQWHLTLTFCPDVDDWRLDELTERVE
AVARKHEPFTLRLAGAGAFPSVERAKVLWAGVDQPEGRPLHALAAGARSAANAAGCAPDG
ARFRPHLTLARLGGRDDATAWLRVLDTFTSSRWEVSEIALVDSFLGEGPRGRARHEVVAR
LPLGAGERRWWDPPVG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcggatgttcgtcgcggtcgcgccgcccgacgaggttcgcgaggaactggaa
cggttcctcgaaccgcggccgggtctggcgtggaccaaccccgcccagtggcacctcacc
ctgacgttctgtcccgacgtcgacgactggcgcctcgacgagctgaccgagcgtgtggag
gcggtcgcccggaagcacgagccgttcacgctacgcctggccggcgcgggggcgttcccg
tccgtcgagcgggccaaggtgttgtgggcgggggtcgaccagcccgaggggcggccgctc
cacgcgctcgccgcgggcgcccgttcggccgccaacgcggcgggctgcgccccggacggc
gcccggttccgtccccacctcacgctcgcccggctcggcggccgtgacgatgcgaccgcc
tggctgcgggtgctcgacaccttcacgagcagccggtgggaggtctccgagatcgcactc
gtcgactcgttcctcggcgaggggccgcggggccgggcccgccacgaggtcgtcgcccga
ttgccgctgggtgcgggcgagcgacgctggtgggacccgcccgtggggtga
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