Dietzia kunjamensis: NHB83_01305
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Entry
NHB83_01305 CDS
T08346
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dkn
Dietzia kunjamensis
Pathway
dkn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NHB83_01305 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dkn01007
]
NHB83_01305 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dkn03016
]
NHB83_01305 (serS)
Enzymes [BR:
dkn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
NHB83_01305 (serS)
Amino acid related enzymes [BR:
dkn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NHB83_01305 (serS)
Transfer RNA biogenesis [BR:
dkn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NHB83_01305 (serS)
Prokaryotic type
NHB83_01305 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Phe_tRNA-synt_N
Motif
Other DBs
NCBI-ProteinID:
USX46183
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All DBs
Position
270379..271641
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AA seq
420 aa
AA seq
DB search
MIDLKLLRENPDVVRDSQRTRGEDPSLVDQLLTADEARRSSIAAADGARAEQKAHGKKVG
QASPDERPALLEAAGALKQAVKDAEEAEKTAAAEVERLQRLLSNVVEEGTPAGGEDDFVE
IERVGEIPTFDFEPKDHLELGESLGLLDMERGAKVSGARFYFLTGYGALLQLGMLQLAAQ
KATANGFTMMIPPVLVRPEIMQGTGFLGAHADEVYKLDADDLYLVGTSEVALAGYHQGEI
LDLSDGPKRYCGWSSCFRREAGSHGKDTRGIIRVHQFDKVEMFSWCRPEEAHAEHKRLLG
FEKEMLEAMGLPYRVIDIAGGDLGSSAARKYDCEAWVPTQGTYRELTSTSNCTTFQARRL
GVRYRDDEGRTQTAATLNGTLATTRWLVAILENHQQADGSVVVPEALRPFVGKDVLEPIR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatctcaagctgctccgcgagaaccccgacgtcgtccgcgactcccagcgcacc
cgtggtgaggacccgtcgctggtcgaccagctgctcaccgccgacgaggcccgcaggtcc
tcgatcgcggccgcggacggggcccgcgccgaacagaaggcccacggcaagaaggtcgga
caggcctcgcccgacgagcgtcccgcgctgctcgaggccgcgggtgcgttgaagcaggcg
gtcaaggacgccgaggaggccgagaagaccgccgcggcggaagtcgagcgactccagcgg
ctgctgtccaacgtcgtcgaggagggcacgcccgccggcggcgaggacgacttcgtggag
atcgagcgcgtcggcgagatcccgaccttcgacttcgagccgaaggaccacctcgagctc
ggcgagagcctggggctgctcgacatggagcgcggagcgaaggtctccggcgcgcgtttc
tacttcctcaccggctacggcgccctgctgcagctgggcatgctgcagctggcggcgcag
aaggcgaccgccaacggcttcacgatgatgatcccgcccgtcctggtgcgaccggagatc
atgcagggcaccgggttcctcggcgcgcacgccgacgaggtctacaagctcgacgccgac
gacctctacctggtcggcacgtccgaggtcgcgctcgcggggtaccaccagggcgagatc
ctcgacctgtccgacgggccgaagcggtactgcggttggtcctcctgcttccgccgcgag
gccgggagccacggcaaggacacccgcggcatcatccgcgtccaccagttcgacaaggtg
gagatgttctcgtggtgcaggcccgaggaggcccacgccgagcacaagcgtctgctgggg
ttcgagaaggagatgctcgaggcgatgggtctgccgtaccgcgtcatcgacatcgcgggc
ggcgacctcggctcctcggcggcccggaagtacgattgcgaggcgtgggtccccacccag
ggcacttatcgcgaactcacctcgacttccaactgcacgacgttccaggcccgccgcctg
ggtgtgcggtaccgcgatgacgagggccggacgcagaccgccgccaccctcaacggcacc
ctcgccacgacgcggtggctggtggcgatcctcgagaaccaccagcaggccgacggctcc
gtcgtggtgccggaggcgctgcggccgttcgtcggcaaggacgtgctcgagccgatccgc
tga
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