Dietzia kunjamensis: NHB83_03730
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Entry
NHB83_03730 CDS
T08346
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dkn
Dietzia kunjamensis
Pathway
dkn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NHB83_03730
09124 Replication and repair
03420 Nucleotide excision repair
NHB83_03730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dkn03021
]
NHB83_03730
03400 DNA repair and recombination proteins [BR:
dkn03400
]
NHB83_03730
Enzymes [BR:
dkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHB83_03730
Transcription machinery [BR:
dkn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NHB83_03730
DNA repair and recombination proteins [BR:
dkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NHB83_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
DUF7108
Motif
Other DBs
NCBI-ProteinID:
USX46605
LinkDB
All DBs
Position
complement(801399..803066)
Genome browser
AA seq
555 aa
AA seq
DB search
MSGGPLIVQSDKTVLLEIDHDQANDARQALAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDVLVNFSRFPVPQPLLVDIAETMARYGRLQLVKSPVHGLTLVSLDSAVLAEVK
RHKKIAPMLGADIDTDTVVVHPSERGRLKQELLKVGWPADDLAGYVDGEAHDIDLSTETE
PWELRDYQQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWK
RELLARTTLTEDEIGEYSGERKEIRPVTIATYQVVTRKTKGVHRALELFDSRDWGLMIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCVEVRVTLTENERMLYATAEAEDKYKLCSTARTKIPVVKSILAKHAGAPTLVIGAY
LDQLEELGDELDAPVIQGSTSNKEREKLFNAFRAGEISTLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRI
IDADDLLGPPIPEVG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggtggaccgctgatcgtccagtcggacaagaccgtgctgctggagatcgaccac
gatcaggcgaacgacgcgcgccaggcgctggccccgttcgccgagctggagcgcgccccc
gagcacgtccacacctaccggatcacgccgctggcgctgtggaacgcccgggccgccggc
cacgacgccgagcaggtggtcgacgtgctggtcaacttctcccgcttccccgtcccgcag
ccgctgctggtggacatcgccgagaccatggcccgctacggccggctccagttggtcaag
agcccggtccacggactgaccctggtctccctggactccgcagtgctcgccgaggtcaaa
cgccacaagaagatcgccccgatgctcggcgccgacatcgacaccgacaccgtcgtggtg
cacccgtccgagcgcggccgcctcaagcaggagctgctcaaggtgggctggcccgccgac
gatctggccgggtacgtcgacggcgaggcccacgacatcgacctgtccaccgagaccgag
ccctgggagctgcgcgactaccagcagatggccgccgactcgttctgggcgggcggctcg
ggtgtcgtcgtgctgccctgcggcgcgggcaagacgatggtcggggcggccgcgatggcc
aaggccaaggccaccacgctcatcctggtgaccaacaccgtcgccggtcggcagtggaag
cgggagctgttggcccgcaccacgctgaccgaggacgagatcggcgagtactccggcgag
cgcaaggaaatccgcccggtcaccatcgccacgtaccaggtggtcacccgcaagaccaag
ggcgtccaccgggcgttggagctgttcgactcccgcgactgggggttgatgatctacgac
gaggtgcacctgctgcccgcgccggtgttccggatgaccgcggacctgcagtcccggcgc
cggctcgggctcaccgccaccctggtgcgcgaggacggccgagagggtgacgtcttctcc
ctcatcggacccaagcggtacgacgccccgtggaaggacatcgaggcgcagggctggatc
gccccggccgactgcgtcgaggtacgggtgacgctcacggagaacgaacggatgctctac
gccaccgccgaggcggaggacaaatacaagctgtgctcgaccgcacggaccaagatccct
gtggtcaagagcatcctcgccaagcacgccggcgccccgaccctggtgatcggtgcctac
ctcgaccagctcgaggagctcggcgacgagctcgacgccccggtcatccagggctccacc
tccaataaagagcgtgagaagctcttcaacgcgttccgcgccggggagatctccacgctc
gtggtgtccaaggtcgcaaacttctcgatcgacctgcccgaggccagtgtggccgtgcag
gtgtcggggacgttcggctcccggcaggaggaggcgcagcggctgggccggctgctgcgg
cccaagcacgacggtggccaggcacacttctactcggtggtctcgcgcgacaccctcgac
gccgagtacgccgcgcaccggcagcggttcctcgccgagcaggggtacgcctaccggatc
atcgacgccgacgacctgctggggccgccgatccccgaggtcggctga
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