Dietzia kunjamensis: NHB83_06320
Help
Entry
NHB83_06320 CDS
T08346
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dkn
Dietzia kunjamensis
Pathway
dkn03030
DNA replication
dkn03430
Mismatch repair
dkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHB83_06320 (dnaE)
03430 Mismatch repair
NHB83_06320 (dnaE)
03440 Homologous recombination
NHB83_06320 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dkn03032
]
NHB83_06320 (dnaE)
03400 DNA repair and recombination proteins [BR:
dkn03400
]
NHB83_06320 (dnaE)
Enzymes [BR:
dkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHB83_06320 (dnaE)
DNA replication proteins [BR:
dkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHB83_06320 (dnaE)
DNA repair and recombination proteins [BR:
dkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHB83_06320 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
USX47523
LinkDB
All DBs
Position
1358207..1361707
Genome browser
AA seq
1166 aa
AA seq
DB search
MLDGMAQIDPLFAEASRLGMPAVGMTDHGNMYGSSDFYKQAVKTGIKPIIGIEAYVAPES
RFNKKRVLWGEKNQKSDDVAGSGAYTHMTMVAENATGLRNLFRLSSLASYEGQLGKWARM
DAEILAEHSEGIIATSGCPSGEIQTRLRLGHRKEAYEAAEKWQSIFGKDNFFLELMDHGI
DIERRVREDLLTLGKDLGMPPLVTNDCHYVTREQAHYHEAMLCVQTGKTLADENRFKFDG
DGYFLKSADEMRAQWDTEVPGGCDNTLWIAERVQPYDDIWAPKDRMPKFPVPDGETEDTW
LAREVQKGLEWRFPDGVPQEYLDRAAFELEVIKGKGYPGYFLVVGDLIEHARSIGIKVGP
GRGSAAGALVAYALKITNIDPIEHGLLFERFLNPERPSAPDIDIDFDDRRRGEMIRYASD
KWGADKIAQVITFGTIKTKAAIKDAARVNFGQPGYAIADRITKALPPPIMAKDIPLSGIT
DSKHERFGEAAEVRQLIETDPDVKRIYDTARGLEGMVRQAGVHACAVIMSSEPLLDVIPM
WKRAQDGAIITGWDYPSCEDIGLLKMDFLGLRNLTVIGDCLENIKLNRGEEIDLDVLSTD
DPATYELLARGDTLGVFQLDSGGMRELLKRMKPTGFNDIVAALALYRPGPMGMGTHWNYA
DRKNGKQELVPIHPELEEPLREILGETHGLIVYQEQIMAISRELAGYTAGEADGFRKAMG
KKKAEVLAAEYEKFSGGMFERGFSKDAVDALWGTIEPFASYAFNKSHAAGYGLVSFWTGY
LKANYPAEYMAALLTSVGDDKDKAALYLSNCRQMGIKVLPPSVNESRTNFLSVGTDIRFG
LGAVRNVGAQVVDSIVAAREAKGEFGDFSDYLAKIDQTACTKKVTESLVKAGAFDSLGHP
RKGLFLVHADAVESVMSTKKAEAVGQFDLFGGGDDAEADSGFGDVFAVRVPDEEWDIKQK
LALEREMLGLYVSGHPLDGLEAALEAKTDTTIATIHEGELAHGTAVTIGGIISGVDRRVN
KNGEPWAIVTIEDFNGSVEVLFFPKTYRLAAMDIAEDAVVLVKARINIREDRVSVFGDTL
EVPDLVVGGNGAPLALTLPTRMCTIETVTALKQVLGRHPGPSDVHLRLVNGSSSTVLRLD
DHLRVETSSSLMGDLKALLGPGCLTG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgggatggcgcagatcgacccgctgttcgcggaggcctcccggctcggcatg
ccggcggtcgggatgaccgaccacggcaacatgtacggctcgtcggacttctacaagcag
gccgtcaagaccggcatcaagccgatcatcgggatcgaggcgtacgtcgcccccgagtcg
cggttcaacaagaagcgcgtgctgtggggcgagaagaaccagaagagcgacgacgtcgcg
ggctccggcgcgtacacccacatgacgatggtcgccgagaacgccaccggcctgcgcaac
ctcttccgcctgtcctcgctggcctcctacgaggggcagctgggcaagtgggcgcgcatg
gacgccgagatcctcgccgagcactccgaggggatcatcgccacctccggctgcccctcc
ggtgagatccagacgcggctgcgcctgggccacaggaaggaggcctacgaggccgcggag
aagtggcagtcgatcttcggcaaggacaattttttcctcgagttgatggaccacgggatc
gacatcgagcgcagggtccgcgaggacctcctcacgctcggcaaggacctggggatgccg
ccgttggtgaccaacgactgccactacgtcacccgcgagcaggcccactaccacgaggcc
atgctctgcgtgcagaccggaaagaccctcgccgacgagaaccgcttcaagttcgacggt
gacggctacttcctcaagtccgccgacgagatgcgcgcccagtgggacaccgaagtcccc
ggcggctgcgacaacaccctgtggatcgccgagcgcgtccagccgtacgacgacatctgg
gcccccaaggaccggatgcccaagttccccgtccccgacggcgagaccgaggacacctgg
ctggccagggaggtccagaagggtctggagtggcggttcccggacggcgtcccgcaggag
tatctcgaccgcgccgcgttcgagctcgaggtcatcaagggcaagggttaccccggctac
ttcctggtggtcggtgacctcatcgagcacgcccgctccatcggtatcaaggtcggaccc
ggccgaggctcggccgccggcgccctggtcgcgtacgcgctgaagatcaccaacatcgac
ccgatcgagcacgggctgctgttcgagaggttcctcaaccccgagcgtccgtcggcgccg
gatatcgatatcgacttcgacgaccgccgtcgcggcgagatgatccgctacgcctccgac
aagtggggcgccgacaagatcgcccaggtcatcacgttcggcaccatcaagaccaaggcc
gccatcaaggacgccgcgcgcgtgaacttcggccagcccggctacgcgatcgccgaccgg
atcaccaaggcactgccgccgccgatcatggccaaggacatcccgctgtccgggatcacc
gactccaagcacgagcgcttcggtgaggccgccgaggtccgtcagctcatcgagacggac
cccgacgtcaagcggatctacgacacggcccgcgggctcgagggcatggtccgccaggcc
ggcgtgcacgcctgcgcggtgatcatgtcctccgagccgctgctcgacgtgatccccatg
tggaagcgcgcgcaggacggcgccatcatcaccggctgggactacccgtcgtgtgaggac
atcggcctgctcaagatggacttcctgggcctgcgcaacctcacggtgatcggcgactgc
ctggagaacatcaagctcaaccggggcgaggagatcgacctcgacgtcctgagcacggac
gaccccgcgacctacgagctgctcgcccgcggtgacacgctgggcgtgttccagctcgac
tccggcggcatgcgcgagctgctcaagcggatgaagcccaccggcttcaacgacatcgtg
gccgccctcgccctgtaccgccccgggccgatgggcatggggacgcactggaactacgcc
gaccgaaagaacggcaagcaggaactggtgcccatccaccccgagctcgaggaaccgctc
cgggagatcctcggcgagacccacggcctgatcgtgtaccaggagcagatcatggccatc
tcccgcgaactcgcgggatacacggccggtgaggccgacggcttccgtaaggccatgggc
aagaagaaggccgaggtgctggccgccgagtacgagaagttctccggcggcatgttcgag
cgcggcttctccaaggacgccgtcgacgcactgtggggcaccatcgagcccttcgcctcg
tacgcgttcaacaagtcgcacgcggccggctacggcctcgtgtccttctggaccggctac
ctcaaggccaactacccggccgagtacatggccgcgctgctcacctccgtcggcgacgac
aaggacaaggccgccctgtacctgtccaactgccgccagatgggcatcaaggtcctgccg
ccgtcggtcaacgagtcgcggaccaacttcctgtcggtgggcacggacatccgcttcgga
ctgggcgcggtgcgcaacgtcggcgcccaggtggtcgactcgatcgtcgccgcccgcgag
gcgaagggcgagttcggcgacttctcggactacctggccaagatcgaccagaccgcctgc
accaagaaggtcaccgagtcgctcgtcaaggccggcgccttcgactctctcggccacccg
cgcaagggactgttcctggtccacgccgacgcggtggaatcggtgatgtccaccaagaag
gccgaggcggtgggtcagttcgacctgttcggcgggggagatgacgccgaggccgactcg
ggctttggcgacgtcttcgccgtccgggtccccgacgaggaatgggacatcaagcagaag
ctcgccctggaacgcgagatgctgggtctgtacgtgtccgggcacccgctggacgggctc
gaggccgccctggaggccaagaccgacaccaccatcgccaccatccacgagggcgagctc
gcgcacggcaccgccgtgacgatcggcgggatcatctccggcgtcgaccggcgggtcaac
aagaacggcgagccgtgggcgatcgtcaccatcgaggacttcaacggcagtgtcgaggtg
ctgttcttccccaagacgtaccgtctcgcggcgatggacatcgccgaggacgcggtggtg
ctggtcaaggcgcgcatcaacatccgtgaggaccgcgtctcggtgttcggcgacaccctc
gaggtgcccgacctggtcgtcggtggcaacggggcgccgctggcgctcacgctgccgacg
cggatgtgcaccatcgagaccgtcaccgcgctcaagcaggtcctggggcggcaccccgga
ccgtcggacgtgcacctgcggttggtcaacggaagttcgtcgaccgtcctgaggctcgac
gaccacctgcgggtcgagacctcgtcctcgctgatgggcgatctcaaggcgctgctcggc
cccggctgcctcacgggctga
DBGET
integrated database retrieval system
