Dietzia kunjamensis: NHB83_06680
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Entry
NHB83_06680 CDS
T08346
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dkn
Dietzia kunjamensis
Pathway
dkn03030
DNA replication
dkn03410
Base excision repair
dkn03420
Nucleotide excision repair
dkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHB83_06680 (polA)
03410 Base excision repair
NHB83_06680 (polA)
03420 Nucleotide excision repair
NHB83_06680 (polA)
03440 Homologous recombination
NHB83_06680 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dkn03032
]
NHB83_06680 (polA)
03400 DNA repair and recombination proteins [BR:
dkn03400
]
NHB83_06680 (polA)
Enzymes [BR:
dkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHB83_06680 (polA)
DNA replication proteins [BR:
dkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NHB83_06680 (polA)
DNA repair and recombination proteins [BR:
dkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NHB83_06680 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHB83_06680 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
USX47128
LinkDB
All DBs
Position
1435524..1438310
Genome browser
AA seq
928 aa
AA seq
DB search
MSTTSQTAEANTALGSGASSGAPAGEGPTRLLLLDGHSLAFRAFYALPAENFSTASGQHT
NAVYGFLSMVANLVTEEEPTHLAVAFDVSRATLHRTAEYPEYKSTRSAAPEEFKGQVELI
QEALVALGVRTLSLEGHEADDIIATLATHSGGAETLICTGDRDALQLVSDEVTVLYPVKG
VSELARFTPAAVEAKYGVTPAQYPDVAALRGDTSDNLPGVPKVGDKTAAKWITQYGTLSE
LIAHADEVKGKVGESFREHLPQVQLNRRITELTRDLDLGVEIRDLVRATPERADVNALFD
RLEFGPQARDRFLSAFLPEGAPQPAAEVELEQASVLHAGEVSDWLAAHAPAGQRHGLVVV
GPSRPGAGDAQTITIAAAGGASGHLDLAAIGPDDEQALRAWLADDAVSKAVHDAKAATHA
LTGRGLRLGGVTMDVALAAYLVRPGQRSYGLAELFQRHLQRELPEAEVGDKQLSLLDDVD
DAETEQKNADAAATRARAVVDLAERLDVELEQVHGARLMAEMELPLVPVLARMESLGIAV
DGGALEGLRDDFADRGRQAADAAYAAIGGEQINLGSPKQLQVVLFETLGMPKTKKTKTGY
TTDAKALEELLTKETGDTPGRAFLEALLLHRETTKMRTTVEGLIKTIGDDGRIHTTFNQT
VAATGRLSSTDPNLQNIPVRTEDGRRIRESFVVGEGYDCLLTADYSQIEMRVMAHLSGDA
GLIEAFRTGEDLHSFVGSRAFGVPIDEVTAELRRRVKAMSYGLAYGLSAFGLAAQLGISQ
GEAKEQMEAYFSRFGGVRDYLRAVVEQARRDGYTETLFGRRRYLPELNSDNRLKRENAER
AALNAPIQGTAADIIKAAMLKVDADLTERGLKSRLLLQVHDELVLEVAEGELDEVRGLVV
DRMYSAIELDVPLDVSTGTGPDWDSAAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccacgagtcagaccgcagaagccaacaccgccctcggttcgggcgcctcctcc
ggcgccccagcgggggaggggcccacccgactgctgctcctggacgggcactcactcgcg
ttccgtgcgttctacgcgctgccggccgagaacttctccacggcgtccggccagcacacg
aacgccgtgtacggattcctgtcgatggtcgccaacctggtgaccgaggaggagcccacg
cacctggccgtggcgttcgacgtctcccgtgcgacgctgcaccgcacggcggagtacccc
gagtacaagtccacccggtcggccgcgcccgaggagttcaaggggcaggtcgaactcatc
caggaggcgctggtggcgttgggggtgcggacgctgtctctggagggccacgaggccgac
gacatcatcgccaccctcgccacacactcgggcggcgccgagacgctgatctgtacaggg
gaccgtgacgctctgcagctggtgtccgacgaggtcaccgtcctctacccggtcaagggg
gtctccgaactcgcccgattcacacccgccgcggtcgaggcgaagtacggggtgacgccc
gcccaatacccggacgtggccgctctgcgcggtgacacctccgacaacctcccgggcgtg
cccaaggtcggcgacaagaccgcagccaagtggatcacgcagtacggcaccctctcggag
ctcatcgcgcacgcggacgaggtcaagggcaaggtcggtgaaagcttccgtgagcacctg
ccccaggtgcagctcaaccggcggatcaccgagctcacgcgtgacctggacctcggcgtc
gagatcagggacctcgtccgcgcgaccccggagcgtgccgacgtcaacgcactgttcgac
cggttggaattcgggccccaggcgcgcgaccgcttcctctccgccttcctgccggagggc
gccccccagcccgccgccgaggtggagctcgagcaggcctcggtgctgcacgcgggcgag
gtctccgactggctcgccgcccacgcgccggccgggcagcggcacggcctcgtcgtcgtc
ggaccctcccggcccggggcgggcgacgcacagaccatcaccatcgccgccgccggcggg
gcctccggacacctcgatctcgcggccatcgggccggacgacgagcaggcgctgcgcgcc
tggctggccgacgacgcggtatccaaggcggtccacgacgccaaggccgccacgcacgca
ctgacggggcgcgggctccggttgggcggggtgaccatggacgtggccctggccgcctac
ctggtgcgacccggacaacgcagctacggactggcggagctgttccaacgccatctgcag
cgcgaactgcccgaggcggaggtgggggacaagcaactgtccctgctcgacgatgtcgat
gacgccgagactgagcagaagaacgccgacgccgccgcgacccgcgcccgcgcggtggtc
gatctcgcggagcggctggacgtggagcttgagcaggtgcacggggcgcgcctgatggcg
gagatggaacttccgctcgtgccggtgctggcgcggatggagtcgctcgggatcgcggtg
gacggcggcgccctggagggattgcgggacgacttcgccgaccgcgggcggcaggcggcc
gacgccgcctacgccgcgatcggcggcgaacagatcaacctcggctcgcccaagcagttg
caggtcgtgctgttcgagaccctcggcatgcccaagaccaagaagaccaagaccgggtac
accaccgacgccaaggcgctggaggaactgctcaccaaggagacgggcgacaccccggga
cgggcgttcctcgaggcactactgctgcaccgcgagaccaccaagatgcggaccacggtc
gaggggctcatcaagaccatcggtgacgacgggcgtatccacaccacgttcaaccagacc
gtggccgcgaccggccggctgtcctcgacggaccccaatctgcagaacatccccgtgcgc
accgaggacggtcgacgcatccgcgagtcgttcgtcgtgggtgagggttacgactgtctt
ctcaccgccgactacagccagatcgagatgcgggtgatggcacacctgtccggcgacgca
gggctcatcgaggcgttccggacgggggaggatctccactcgttcgtcggctcgcgcgcg
ttcggcgtgccgatcgacgaggtcaccgcggagctccgtcgccgggtcaaggccatgagc
tacgggctggcctacgggctcagcgcgttcggcctcgccgcccagctcgggatcagccag
ggtgaggcgaaagagcagatggaggcctacttctctcgcttcggcggcgtgcgcgactac
ctgcgcgcagtggtcgaacaggcccgccgagacggctacacggagacactgttcgggcgg
cgtcgctacctgcccgagctcaactcggacaaccggctcaagcgggagaacgccgaacgt
gccgcgctcaacgcacccatccagggcacggccgccgacatcatcaaggcggccatgctc
aaggtcgacgcggacctcaccgaacgggggctgaagagccgccttctactccaggtccac
gacgaactcgtgctcgaggtggcggagggcgaactcgacgaggtccggggcctggtcgtg
gaccgcatgtactcggctatcgagctcgacgtcccgctggacgtctcgaccggaaccggt
ccggattgggactcggcggcgcactga
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