Dietzia kunjamensis: NHB83_07155
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Entry
NHB83_07155 CDS
T08346
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dkn
Dietzia kunjamensis
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NHB83_07155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dkn03021
]
NHB83_07155
Transcription machinery [BR:
dkn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NHB83_07155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Extensin_1
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
USX47203
LinkDB
All DBs
Position
complement(1543233..1544624)
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AA seq
463 aa
AA seq
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MAATKTTSSDSAASGDPLDSEVAGEAPAKKTAARKAPAKKTAAKKTAAKKAPAKKAAAKK
TAAKKTAAKKTAAKKTAAPTKPEGVDGDQVDEEPTDAPEAEPDTSELEDVEVDVEDVEAD
EETKEEPTAKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEE
EVELAKRIEAGLYATWFQAQVAERGEKLTTAQKRDYRWIERDGVRAKNHLLEANLRLVVS
LAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQART
IRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQ
TIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLRSVLDTLSEREAGVVRLRFGLTDGL
PRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccacgaagaccaccagttcggattccgcggcgagcggcgatccgttggacagc
gaggtcgctggcgaggcccccgccaagaagaccgccgcgcgcaaggcgcccgcgaagaag
acggcggccaagaagaccgccgccaagaaggccccggcgaagaaggcggccgccaagaag
accgcggccaagaagacggccgccaagaagaccgcggccaagaagaccgccgccccgacg
aagcccgagggcgtcgacggcgaccaggtcgacgaagagccgaccgatgctcccgaggcc
gagccggacacctccgagctggaggacgtcgaggtcgacgtcgaggacgtcgaagcggac
gaggagaccaaggaagagcccaccgccaaggacaaggcgtcgggcgatttcgtctgggac
gaggacgagtccgaggccctgcgccaggcgcgcaaggacgccgagctgaccgcctccgcc
gactccgtacgcgcgtacctcaagcagataggcaaggtcgccctcctcaacgccgaggag
gaggtcgagctggccaagcgcatcgaggccggcctgtacgccacctggttccaggcgcag
gtcgccgagcgcggggagaagctcaccaccgcgcagaagcgtgattaccgatggatcgag
cgcgacggcgtccgcgccaagaaccacctgctcgaggccaacctgcgactcgtcgtctcg
ctggccaagcgctacaccggccgcggcatggcgttcctggacctcatccaggagggcaac
ctcggtctgatccgcgcggtcgagaagttcgactacaccaagggctacaagttctcgacc
tacgccacctggtggatccggcaggccatcacccgcgcgatggccgaccaggcccgcacc
atccgtatcccggtgcacatggtcgaggtcatcaacaagctcgggcgtatccagcgtgag
ctgctccaggacctgggccgcgagcccacccccgaggagctcgccaaggagatggacatc
acgccggagaaggtgctggagatccagcagtacgcccgggagccgatctcgctcgaccag
accatcggcgacgagggcgactcgcagctcggtgacttcatcgaggactccgaggccgtg
gtggccgtggacgccgtgagcttcacactcctgcaggaccagctccgttccgtcctcgac
acgctgtccgagcgtgaggcgggcgtggtgcggctgcgcttcggcctcaccgacgggctg
ccgcgcaccctcgacgagatcgggcaggtctacggggtcacgcgcgagcggatccggcag
atcgagtccaagacgatgtcgaagctgcgccacccgtcgcggtcccaggtgctgcgcgac
tacctggactga
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